Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1750 ATGGCGTTTCTAAATTCTTCTGTGCTGTTAATCCTTCTCATTTTGGTTCTGTCGTTACAGTGTTCATCTTCATTCTCCGGAAAGGTTTTCTTCCTATCGGTGGAGAATCCAGATAACGTTATAAAATCAAGGAACGAAGTGTTTACTGCTGGATTTTATAATGTTGGCGAGAATGCCTTTGTCTTTGCCATCTGGTTCAGTGAACCTCAAGGCAAAAACGTGACCCCCATTTGGATGGCAAATCGTGACGACCCCGTCAACGGGATAGGCTCAACGCTTACCCTCCATGCTACTGGTAATCTTGTGTTAAATGATGCAGGTCACTTTGATGTTTGGGCCACCAACACCACCTCCACCACCTCTCCAAAATTGGTTCTCAATGATAATGGTAATCTTAATCTTCGTGAATCTAACGGAAAAATCCTATGGCAAAGTTTTGACGATCCAACTGATACACTTGTCCCTGAACAAACTCTCACTAGATTCACAAAGCTCATCTCATCCAGAAGTCAGACTAACTGCTCCTCAGGTTTTTATAAGTTGTTTTTCGACTATGATAATGTTCTTTGTCTTCTCTATGAAGGTCTTGATGTTGCAAGTATCTACTGGCCACATCCTTGGCTCATTAGTTGGGAAGCCGGAAGGTCCACATACAATGCAAGTCGCACTGCAATTCTGAATTCGTATGGTAAATTTAGTTCAACTGATGACCTTACTTTCAAGACATCAGATTATGGCCCTGTGCTTCAGAGAAGATTGACTATTGATTATGATGGTAATCTTCGAGTCTATAGTCGAAAAAGCGGGGGAGAGAAATGGAGTGTTTCATGGCAAGCCGAATCACAACCTTGCAGGATTCATGGCATCTGTGGAGTCAACAGTTTTTGCACCAATGATCCTTATTCTGGTAGAAAATGCTCTTGTCTTCCTGGTTACAAGGTTAAGAATGTAAGTGACTGGTCTTTTGGGTGTGAGCCTGAATTCAATTTGTCTTGCGGATCAACAGAGTCTCGCTTTTTGCATATAAAAAATTCTGAGTTCTATGGCTATGATCAAGGATACTTCCAAAATTATACTTATAAACAATGTGTGGATGCATGCTTGGAATTGTGTAGCTGCAAAGGATTTCAATATAAATGGATTCCTGAAAATGGCTCTTATACTTGTTACAGAAAGACACGTTTGCTCAACGGGTATGTTTCCCCTAGTTTTTATGGATCAATATACTTGAGAGTATCTATATCTAGCTCCTTCACTTTTGAACAATCTACTGCGAAGAAGTGTGATAGTGTCAACTCTATAATGCTTGAAAGATTGTATGGGTTAAGGCCCGTTAGACTTTTGATAAAGGTGCTATTTTGGTTAGTATTGGCAATTGGGTCCTTTGAAGTTGTGAGCATCTTTCTAGTCTGGTGTCTATTAAGGACACGAGGAAAGTCGAGTACAGATCAACACAACTATCATCTTGGTGCTACTGGATTTAGAAACTATAACTATTCTGAGTTGAAAGAGGCAACAAAAGGGTTTAGTGAAGAGATTGGTCGGGGAGCTGGGGGAATTGTATACAAGGGTGTATTGACAGACCAACGAGTTGCAGCAATCAAAAGACTCAACAAAGCGAGCCAAGATGAAAGTGAGTTTTTAGCTGAGGTAAACATAATTGGAAGGCTTAATCACATGAACCTAATCGACATGTGGGGGTATTGCGCAGAAGGCAAGCACAGATTGTTAGTGTATGAGTACATGGAGAATGGCTCTTTGGGAGAAAATCTGGCGTCCAATAGCTCGTCACTCGATTGGAAGAAGCGGTACAACATTGCTCTGGGCACAGCCAGAGGTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATAAAGCCTCAAAACATACTTTTGGACTCAGAATATCAACCTAAAGTGGCAGATTTTGGGTTGTCTAAATTGGTGAAAAGAAATGATGCCAACAACTCTGGCTTCTCAAGGATAAGAGGAACTAGAGGTTACGTGGCACCTGAGTGGGTGTTCAATTTGCCAATTACGTCTAAGGTGGATGTGTATAGCTATGGGATTGTTGTGTTGGAGATGATAACGAGAAAAAGCCAAGTGGGGTCCCCCATGGTGGATGGGATAGAGTCCCATCACGGAAGGTTAGTGACATGGGTGAGGGAGAAAAAGAATAATAGAGGAAATGGAACAACATCGTCGTGGGTGGAACAAATCATTGATCCTACGCTTGAGGGAAATTATGAGATTGGGAAGATGGAGATGCTGGCTAGGGTGGCTTTGGACTGTGTTGAGGAAGATAGGGAAGAAAGACCGACAATGGGTCAAGTAGTGGAGATGCTTTCAGGGTCATGA 2373 0.4176 MAFLNSSVLLILLILVLSLQCSSSFSGKVFFLSVENPDNVIKSRNEVFTAGFYNVGENAFVFAIWFSEPQGKNVTPIWMANRDDPVNGIGSTLTLHATGNLVLNDAGHFDVWATNTTSTTSPKLVLNDNGNLNLRESNGKILWQSFDDPTDTLVPEQTLTRFTKLISSRSQTNCSSGFYKLFFDYDNVLCLLYEGLDVASIYWPHPWLISWEAGRSTYNASRTAILNSYGKFSSTDDLTFKTSDYGPVLQRRLTIDYDGNLRVYSRKSGGEKWSVSWQAESQPCRIHGICGVNSFCTNDPYSGRKCSCLPGYKVKNVSDWSFGCEPEFNLSCGSTESRFLHIKNSEFYGYDQGYFQNYTYKQCVDACLELCSCKGFQYKWIPENGSYTCYRKTRLLNGYVSPSFYGSIYLRVSISSSFTFEQSTAKKCDSVNSIMLERLYGLRPVRLLIKVLFWLVLAIGSFEVVSIFLVWCLLRTRGKSSTDQHNYHLGATGFRNYNYSELKEATKGFSEEIGRGAGGIVYKGVLTDQRVAAIKRLNKASQDESEFLAEVNIIGRLNHMNLIDMWGYCAEGKHRLLVYEYMENGSLGENLASNSSSLDWKKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSEYQPKVADFGLSKLVKRNDANNSGFSRIRGTRGYVAPEWVFNLPITSKVDVYSYGIVVLEMITRKSQVGSPMVDGIESHHGRLVTWVREKKNNRGNGTTSSWVEQIIDPTLEGNYEIGKMEMLARVALDCVEEDREERPTMGQVVEMLSGS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1750 790 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Acco10g1750 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Acco10g1750 790 CDD EGF 283 312 - -
Acco10g1750 790 Gene3D Phosphorylase Kinase; domain 1 473 581 - -
Acco10g1750 790 ProSiteProfiles EGF-like domain profile. 280 318 IPR000742 -
Acco10g1750 790 PANTHER OS07G0415500 PROTEIN 4 789 - -
Acco10g1750 790 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 206 IPR036426 -
Acco10g1750 790 CDD PAN_AP_plant 328 413 - -
Acco10g1750 790 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Acco10g1750 790 CDD STKc_IRAK 513 787 - -
Acco10g1750 790 CDD B_lectin 43 149 IPR001480 -
Acco10g1750 790 ProSiteProfiles Protein kinase domain profile. 507 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1750 790 Gene3D - 33 147 IPR036426 -
Acco10g1750 790 Pfam S-locus glycoprotein domain 239 315 IPR000858 GO:0048544
Acco10g1750 790 Pfam Protein kinase domain 510 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1750 790 FunFam Serine/threonine-protein kinase 582 790 - -
Acco10g1750 790 SMART serkin_6 507 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1750 790 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Acco10g1750 790 Pfam PAN-like domain 332 393 IPR003609 -
Acco10g1750 790 PIRSF SRK 1 790 IPR024171 GO:0004674
Acco10g1750 790 Gene3D - 148 272 IPR036426 -
Acco10g1750 790 Gene3D Transferase(Phosphotransferase) domain 1 582 790 - -
Acco10g1750 790 SMART blect_4 32 149 IPR001480 -
Acco10g1750 790 Pfam D-mannose binding lectin 75 161 IPR001480 -
Acco10g1750 790 FunFam S-receptor-like serine/threonine-protein kinase 476 581 - -
Acco10g1750 790 SUPERFAMILY Protein kinase-like (PK-like) 483 787 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1750 Acco-ChrAcco10 30696571 30698943 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1750 497 787 Trihelix Transcription Factor Family AT5G38560 42.373 1.70e-65 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco10g1750 Pkinase 2.5e-52 CL0016