Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1742 ATGCTTAAACAAGGTCATTTCTCCCTTCTGCTTCAAGTTCAAAACTTGCTGTTATTTTTGTCTTCTTTCCTGTTGTTTTTACTCTGCTCCTTTGTTGCTCCTTCAAGGCCCCTCCTGCATAATCTTCCACCTGCATTTCCTCTGCTCCTACCTCCTGATGCTGCTGCATTATTGTCATTCAAATCCAAAGCTGATCTCAACAATCACCTCTTTTTCTCTCCTAACACCTCCGCAGATGCTTTCTGTAAATGGCAAGGTGTTCAATGCAATGCAAAGCTGAAAGTGGAGCGTCTTGTTCTTCAAGGTTTAGATCTCGGAGGTATTTTCGCTCCCAACACACTGTCTCTTCTTGACCAGCTCCGAGTGCTCAGTTTGCAGAACAATTCTCTCGTCGGACCAATCCCTGATCTCTCCGGTCTTCACAACCTCAAGAGCCTATTCCTCGATAACAACCGCTTCACGGGTTCTTTTCCTCCTTCAATCCTCACACTTCACAGGCTTCGCACGTTAGATTTCTCTCACAACAGTCTCACAGGGCCCATCCCCACCAACTTAACCAAGCTAGACCGTTTCTACTACATCCGTCTCTGCTGGAATAGATTCAATGGCTCCATCCCTCCTTTCAATCAGTCTGCTCTCCGAACATTCGACGTCTCTGGTAACAACTTTTCCGGTCCTATTCCTGTCACGGTCACTTTAGTCCGTTTCGGACCCTCTCCCTTCTCTCAAAACCCAGGCCTCTGCGGCGAAATCATCCACAAAGAATGCCATCCAAGCGCACCTTTCTTTGCACCAGCAGCACCGCTCAAGGCAGCGCCGCCGCCGCCGCCGGTACAGCTTGGTCAGAGCGCCCAGGTTCACGGCGTTGACGGGTTTGTCCGTACGCCCGACAAGAAAACACACAACAGGAACGCCGTTATTATTGGGTTCTCCGCAGCGGTTTGCGTTCTCCTCGCTTCGCTTGTCTGCTTCGTGGTGTCCTTAAGGAGACAGGGAGAGAAGAAGGAGTCTTCGAGGACTCTAATGGATTCTGATGGGGCGGCGACGGCAGAAGTGGTGGCGGTGATGCAAATGGAGCAAGAGAAGGAATTGGAGGAGAAAGTGAAGAAGGTGCAGGAGATGCAAGTGGGGAAGAGTGGGAGCTTAATGTTCTGTGCGGGAGAGGCGCAGCTTTATACGTTGGATCAGCTAATGAGAGCCTCGGCGGAGCTTTTGGGGAGGGGATCGTTGGGGTCCACGTACAAAGCGGTGTTGGATAACCGTTTGATCGTCACTGTGAAGCGCCTTGATGCTGCTAAAGTGGCTTCCGACTCAACCAAGGAAATCTTTGATAGTCATATGGAATCAGTAGGTGGTCTTCGCCACCCCAATCTGGTCCCCCTTAGGGCCTATTTTCAGGCCAGGGAAGAGAGGCTTCTCATCTATGATTACGAGCCTAATGGCAGTCTTTTCTCCCTCATACACGGTTCAAGATCAAGCAGGGCTAGGCCATTGCACTGGACATCGTGTTTGAAGATAGCAGAGGACGTAGCACAAGGGCTGTCCTACATTCACCAAGCCTGGAGACAAGTGCATGGCAATCTCAAGTCCTCCAACGTTTTGCTTGGCCCTGATTTTGAAGCCTGCATCACTGATTACTGTCTCTCCATGTTGGCCAACCCTTCCAGCTTCAACGACGACCCGGATTCAGCTGCGTACAGGGCACCCGAGACCCGCAATCCGAACCACCAGCCGAGCCCCAAAGGTGATGTTTACGCCTATGGTGTTTTGTTGCTGGAACTTCTAACGGGGAAGCCTCCTTCAGAACACCCTTTCTTGGTGCCCACTGATAGGGTGAGTTGGGTGAAATCTGTGCGGGAAGAAAATGGAAGCGAAGATAACAGAATGGACATGCTTGTTGAGGTTGCTACCACCTGTAGCTTGACCTCTCCTGAGCAGAGACCCACATTGTGGCAGGTCTTGAAGATGTTGCAGGAAATTAAAGAGATTGTGTTATTGGAGGATAGTGCATTAGACCTTCGCACCACAATCTCTTAA 2037 0.5042 MLKQGHFSLLLQVQNLLLFLSSFLLFLLCSFVAPSRPLLHNLPPAFPLLLPPDAAALLSFKSKADLNNHLFFSPNTSADAFCKWQGVQCNAKLKVERLVLQGLDLGGIFAPNTLSLLDQLRVLSLQNNSLVGPIPDLSGLHNLKSLFLDNNRFTGSFPPSILTLHRLRTLDFSHNSLTGPIPTNLTKLDRFYYIRLCWNRFNGSIPPFNQSALRTFDVSGNNFSGPIPVTVTLVRFGPSPFSQNPGLCGEIIHKECHPSAPFFAPAAPLKAAPPPPPVQLGQSAQVHGVDGFVRTPDKKTHNRNAVIIGFSAAVCVLLASLVCFVVSLRRQGEKKESSRTLMDSDGAATAEVVAVMQMEQEKELEEKVKKVQEMQVGKSGSLMFCAGEAQLYTLDQLMRASAELLGRGSLGSTYKAVLDNRLIVTVKRLDAAKVASDSTKEIFDSHMESVGGLRHPNLVPLRAYFQAREERLLIYDYEPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRQVHGNLKSSNVLLGPDFEACITDYCLSMLANPSSFNDDPDSAAYRAPETRNPNHQPSPKGDVYAYGVLLLELLTGKPPSEHPFLVPTDRVSWVKSVREENGSEDNRMDMLVEVATTCSLTSPEQRPTLWQVLKMLQEIKEIVLLEDSALDLRTTIS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1742 678 Pfam Protein kinase domain 402 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1742 678 Gene3D Transferase(Phosphotransferase) domain 1 479 670 - -
Acco10g1742 678 Coils Coil 354 374 - -
Acco10g1742 678 Gene3D Ribonuclease Inhibitor 211 260 IPR032675 -
Acco10g1742 678 MobiDBLite consensus disorder prediction 559 581 - -
Acco10g1742 678 SUPERFAMILY Protein kinase-like (PK-like) 403 662 IPR011009 -
Acco10g1742 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 661 IPR046959 -
Acco10g1742 678 Gene3D Ribonuclease Inhibitor 52 210 IPR032675 -
Acco10g1742 678 SUPERFAMILY L domain-like 51 230 - -
Acco10g1742 678 FunFam Nuclear pore complex protein NUP107 51 207 - -
Acco10g1742 678 Gene3D Phosphorylase Kinase; domain 1 366 477 - -
Acco10g1742 678 Pfam Leucine rich repeat N-terminal domain 51 90 IPR013210 -
Acco10g1742 678 ProSiteProfiles Protein kinase domain profile. 399 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1742 678 Pfam Leucine Rich Repeat 166 187 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1742 Acco-ChrAcco10 30632267 30635263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1742 20 671 Receptor kinase-like Gene Family AT5G43020 57.079 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco10g1742 Pkinase 1.2e-30 CL0016