Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1738 ATGAACACTCTATCCCTCTGTTACGCCACGGACCCCACCCCTTCACTTGTCCTTCGCAATCTCAGCTCACAGAGGAGCCTCCACTCGTGCTCGTTTCTCTCCTTCAATTTCAGAAATGCAGAGTCACTTGCACTCTCATCAAAATCCCGACTTCAAAGTTTGCCTTCTCGCCGATGGTTTACTGGAGCCTGCTTCGCTGCAACTTCTGAAATTGACATGGTTAGGAATAAGGAAGGTATTTACGCCCCCAAACAGGATAAAGTCGTAGTCTTATGGGACCTTGATAACAAACCCCCTCGCGGACCGCCATATCAGGCTGCCATGGCACTCAAACAGGTGGCACAGCGCTTCGGTGACGTTGTCGACATGTCTGCCTACGCCAATCGCCACGCATTTATCCACTTACCCCAATGGGTTCTCCACGAACGCCGAGAACGGAAGCAAATAGACATTATGGAGCGAAAAGGAATGATCACGTCTTCTGAGCCGTACGTTTGTGGGGTTTGCGGCCGCAAGTGTAAAACTAATTTAGATCTCAAGAAGCATTTCAAGCAGCTCCATGAGCGAGAGCGTCAGAAAAAGCTGAATCGGATGAGGTCACTCAAGGGGAAAAAGCGTCAGCGTTATAAAGAGAGGTTCGTATCTGGGAATCACAAGTACAATGAGGCAGCAAGGTCTTTGGTTGCCCCTAAGGTGGGATATGGGCTCGCTTCCGAACTAAGGCGTGCCGGAGTATTTGTGAAGACGGTGGAAGATAAACCGCAAGCAGCTGATTGGGCACTGAAGAGGCAGATGCAACACTCAATGAGCCGAGGGATAGATTGGTTGTTTTTGGTGTCCGACGATTCAGATTTTTCGGAGATGTTGAGGAGGGCGAGAGAAGCAAATTTAGGAACGGTAGTTGTGGGTGACTGGGACAAGGCATTAGGACGGCACGCCGACTTATGGGTTCCTTGGATTGGAGTTGAGAATGGTGAGCTTGCAGATACAGATTTAGTGCCAAGGAACAGAAGAAGAGAGTCTTTTGCTGAAGATGATGGTTTCTTTTCAGTATCCCATGACGATGGAGATACTGTTGTTACGAGCGATTTAGATGGAATAGTAGATGAGCTTGTTGCAATGAGAACCGAGTTTAATGATCTGAGGAATGCAACATTCTCGGATGAGGATGCGGAACAAGGGTGGGTTTCGGAAGAACTGGATGAAAATTATATGCTAGTGATTGATGAGGATAAGGAAACAGAAGATGAGATTTATTGA 1260 0.477 MNTLSLCYATDPTPSLVLRNLSSQRSLHSCSFLSFNFRNAESLALSSKSRLQSLPSRRWFTGACFAATSEIDMVRNKEGIYAPKQDKVVVLWDLDNKPPRGPPYQAAMALKQVAQRFGDVVDMSAYANRHAFIHLPQWVLHERRERKQIDIMERKGMITSSEPYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFVSGNHKYNEAARSLVAPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWLFLVSDDSDFSEMLRRAREANLGTVVVGDWDKALGRHADLWVPWIGVENGELADTDLVPRNRRRESFAEDDGFFSVSHDDGDTVVTSDLDGIVDELVAMRTEFNDLRNATFSDEDAEQGWVSEELDENYMLVIDEDKETEDEIY 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1738 419 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 55 361 - -
Acco10g1738 419 CDD PIN_LabA-like 174 304 - -
Acco10g1738 419 Coils Coil 184 204 - -
Acco10g1738 419 ProSitePatterns Zinc finger C2H2 type domain signature. 166 187 IPR013087 -
Acco10g1738 419 Gene3D - 81 319 - -
Acco10g1738 419 ProSiteProfiles Zinc finger C2H2 type domain profile. 164 192 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1738 Acco-ChrAcco10 30596809 30598068 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1738 22 401 C2H2 Transcription Factor Family AT5G52010 61.675 5.43e-171 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco10g1738 None None None