Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1734 ATGGAAGAGCCTCCATGCTCCGGAGCTACTTTGCCTGCCTCACTCCCACCCGGTTGCCGTTTCTATCCTTCCGAAGAGCAGTTGCTCCGTTACTATTTACCCAACAAGAACGCCGGCGGAAATTTCCATGGCTGCGGTCTTATCAGGGAGCTTGACCTGTATGATTATGATCCTTTCCAATTACCTGAAATTGCGTGCTTTTCTTATGGTTATCGCGGAAGGAAGAGGCATTGGTACTGTTACACTGCCAGGGTTTTGAAGGATTCGAAAAGGAAGACTAGGATGGTCAAGAGCGGGTGTTGGATGAGAAAGGGAGGGGTTAGGAATGTGTTGGACGGCGGTGGGAATGTCGTCTTGGGCACCATGACCTCTTTCGTTTTTTATCTAGGGAATTCCCCCAAGAAGGCAAACCAGACGAATTGGATATTGCATGAGTATGCGTTAGTCGATCATCTAAAGGCTTCATTTGTTATTTGTCGAGTATTCTGTAAAGCACGTCATAAGAATAGTGTGTCAGAGAATGGTCTGAGTTCCTGCGCAGAGGAAGGTTTCTCAGCTGTGCGTCGCATTGGCATTCAGCAAAAAGGATATTTTTCACCCGATATAATTGAGACTCAAATTCGTGGTGACTGCCCCATTGATAGAAAGATTCCAGTGTCTCCCTTGAAACCTGCTAGTGAACTAGATGAGAATCAAATTGCAGCTGCATCAGCTTCTGTTGCTACTTTCCACTGTAGTGCAGGTCCTCAAGACAGTCAAATGGGAAAGTTTTCTGGACTTCCTAGTGATGGTGCAATATTTGTTGAGGAATTGGCATCTCAGCAACATTTATCTTCGATTCTAGAGGAGGGTTTCATAGAGTTGGATGATCTAGTTTGA 879 0.4551 MEEPPCSGATLPASLPPGCRFYPSEEQLLRYYLPNKNAGGNFHGCGLIRELDLYDYDPFQLPEIACFSYGYRGRKRHWYCYTARVLKDSKRKTRMVKSGCWMRKGGVRNVLDGGGNVVLGTMTSFVFYLGNSPKKANQTNWILHEYALVDHLKASFVICRVFCKARHKNSVSENGLSSCAEEGFSAVRRIGIQQKGYFSPDIIETQIRGDCPIDRKIPVSPLKPASELDENQIAAASASVATFHCSAGPQDSQMGKFSGLPSDGAIFVEELASQQHLSSILEEGFIELDDLV 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1734 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 222 - -
Acco10g1734 292 Pfam No apical meristem (NAM) protein 16 148 IPR003441 GO:0003677|GO:0006355
Acco10g1734 292 Gene3D NAC domain 24 169 IPR036093 GO:0003677|GO:0006355
Acco10g1734 292 ProSiteProfiles NAC domain profile. 15 164 IPR003441 GO:0003677|GO:0006355
Acco10g1734 292 SUPERFAMILY NAC domain 12 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1734 Acco-ChrAcco10 30572921 30575604 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1734 14 181 NAC Transcription Factor Family AT1G52890 35.955 1.13e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco10g1734 NAM 1.3e-22 No_clan