Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1729 ATGACAAACTATGCGTCTCTGAACGATCAGCTTTCGGCGCACACCTCAATTTTCGGGTTACGACTGTGGGTTGTGCTGGGCATATGCGTAGGAGCAGCCATAGTTATTGTTCTGTTTCTCATATCTCTCTGGTTCACGAAGCGCAACAACAATTCTTCCAACCCCAACTCTTCACAAAATCCTTCCATTCCAAATGTCTCCAAGGAGATCAAGGAAATCAAGATTGACCCGTCTCGTGACCCGAACCATGGAAGGTCCGACTCGTATCCGGAAGCAGAGGCTGAGGGGGATCGGGCCCAAGCCATGCTCGTTCCGCAGCAGGGGGGTGATAGCCAAAGAATTCACATAGAGATTGGTAAAGATCACCGGATTTCGTATCCTGAGAAGGGTGGTGGTTCATCTCATGGAAGTGGTGAGCAGGGTTCAATTTCTGTGCCTGAGGTTTCTCATTTGGGGTGGGGCCATTGGTACACTCTCAGAGAGCTTGAGGTCTCTACCAACGGGTTTGCCGATGAGAACGTCATCGGTGAAGGTGGCTACGGAATTGTTTATCGCGGGGTGTTGGAACATGATACCAAAGTTGCGATTAAAAATTTGCTGAATAACAGGGGACAAGCTGAGAAGGAATTTAAGGTAGAAGTTGAAGCGATTGGACGTGTTCGGCACAAGAATTTGGTGAGGTTACTTGGATATTGTGTTGAAGGAGCCCATCGGATGCTTGTGTACGAGTATGTCAACAATGGAAACCTAGAACAGTGGCTTCACGGAGATGTTGGGCCTTCCAGCCCTCTGACATGGGAGATTCGCATGAATATAATACTTGGAACAGCAAAAGGGTTGACTTACCTTCATGAGGGACTTGAACCTAAGGTGGTTCACCGTGATATCAAGTCAAGCAACATATTGCTAGATAAGCAATGGAATCCAAAAGTCTCTGATTTTGGCCTTGCAAAGCTCTTGGGATCAGAGAGAAGTTATGTGACAACCCGTGTAATGGGAACATTCGGGTATGTATCTCCAGAATATGCAAGTACTGGCATGTTAAACGAAAGAAGTGATGTGTACAGCTTTGGTGTTCTTATCATGGAGATAATTTCTGGAAGAAACCCGGTAGATTACAGCCGGCCTCCTGGAGAGGTGAACCTGGTTGAGTGGCTGAAGTCCATGGTTGCTAATCGGAATGCAGAGGCAGTGCTCGATCCTAGGCTACCTGAGAAGCCTTCTTCAAGGGCACTGAAGCGTGCTTTATTAGTAGCTTTGAGATGTGTGGATCCCAATGCCCAGAAAAGGCCAAAGATGGGGCATATCATACATCTGCTTGAAGCTGATGAGTTCCCTTTTCGAGATGATCGAAGAACTGGAAGGGAAAATGGACGCTCCCAGAGGATGAGCACAAGAGAAGGGTTGAAGGATAAGCAAGTATGTGAATCAGGTGACAGTAGTGGATACGAAAGTAGTGTCCAAACTAGCAAGCCCATAGGCAGAAACCAAGAAACCGAAGAGCAATAG 1509 0.4712 MTNYASLNDQLSAHTSIFGLRLWVVLGICVGAAIVIVLFLISLWFTKRNNNSSNPNSSQNPSIPNVSKEIKEIKIDPSRDPNHGRSDSYPEAEAEGDRAQAMLVPQQGGDSQRIHIEIGKDHRISYPEKGGGSSHGSGEQGSISVPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYRGVLEHDTKVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVNNGNLEQWLHGDVGPSSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVSPEYASTGMLNERSDVYSFGVLIMEIISGRNPVDYSRPPGEVNLVEWLKSMVANRNAEAVLDPRLPEKPSSRALKRALLVALRCVDPNAQKRPKMGHIIHLLEADEFPFRDDRRTGRENGRSQRMSTREGLKDKQVCESGDSSGYESSVQTSKPIGRNQETEEQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1729 502 MobiDBLite consensus disorder prediction 74 96 - -
Acco10g1729 502 FunFam Putative receptor-like serine/threonine-protein kinase 245 455 - -
Acco10g1729 502 Gene3D Phosphorylase Kinase; domain 1 145 244 - -
Acco10g1729 502 CDD STKc_IRAK 175 441 - -
Acco10g1729 502 SMART serkin_6 169 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1729 502 ProSitePatterns Protein kinases ATP-binding region signature. 175 197 IPR017441 GO:0005524
Acco10g1729 502 MobiDBLite consensus disorder prediction 74 94 - -
Acco10g1729 502 MobiDBLite consensus disorder prediction 449 474 - -
Acco10g1729 502 Pfam Protein kinase domain 170 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1729 502 ProSiteProfiles Protein kinase domain profile. 169 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1729 502 SUPERFAMILY Protein kinase-like (PK-like) 150 441 IPR011009 -
Acco10g1729 502 MobiDBLite consensus disorder prediction 478 495 - -
Acco10g1729 502 FunFam Probable serine/threonine-protein kinase At1g01540 149 244 - -
Acco10g1729 502 MobiDBLite consensus disorder prediction 449 502 - -
Acco10g1729 502 PANTHER OS01G0323000 PROTEIN 4 465 - -
Acco10g1729 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Acco10g1729 502 MobiDBLite consensus disorder prediction 124 144 - -
Acco10g1729 502 Gene3D Transferase(Phosphotransferase) domain 1 245 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1729 Acco-ChrAcco10 30543819 30546153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1729 24 467 Trihelix Transcription Factor Family AT5G38560 36.142 4.74e-89 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco10g1729 Pkinase 2.1e-46 CL0016