Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1721 ATGGAAGGTGGCACTAGTGATGGACCAAAGGGGTCATTCTCATGGGCGTCGCATGATGATGAGATGAACTTGACGGCCCAACCTTTTTCAGGAGCTTACGCCAACGATTATGAAGCGACGGGCTTGCCTGTGCCACCACCTGAGCTCTGGGGAACAACACCTGTCCACAAACCTAACTATTGGTGGTCGCTCGCGACTACAAGCACACCAACGTCTCAGGGGAACCTTACGCCGCAACAACAAGAGCATCAAGCCTTGTCGGAGAGGGGGAAGAACACGATGATGAGGGAGATGATATTTGGGATAGCGGCGATGCAGCCGATACAGATAGACGCAGAGTCTGTGAAGCCTCCGAAGAGGAGGAACGTGAAGATATCAAAGGACCCTCAAAGCGTGGCGGCTCGCCGTCGTAGAGAAAGAATCAGCGAGAGAATTAGGATATTGCAGAGACTGGTGCCAGGTGGCACTAAAATGGACACGGCCTCTATGTTAGATGAAGCTATTCACTACCTAAAATTCTTGCAGTCCCAGGTTGACTCCCTCCAACGAGCTGCCTCACTACATAATAACCCACCCCCTCACCTCGTCATGTTCTCTCGCGCCAATTCTTCCTCTAATTTTCTTTCTCTGCGTAAACCTCCCCAACCTCCTCATAACCCTCACCATTTCTGCTGA 675 0.5141 MEGGTSDGPKGSFSWASHDDEMNLTAQPFSGAYANDYEATGLPVPPPELWGTTPVHKPNYWWSLATTSTPTSQGNLTPQQQEHQALSERGKNTMMREMIFGIAAMQPIQIDAESVKPPKRRNVKISKDPQSVAARRRRERISERIRILQRLVPGGTKMDTASMLDEAIHYLKFLQSQVDSLQRAASLHNNPPPHLVMFSRANSSSNFLSLRKPPQPPHNPHHFC 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1721 224 FunFam BHLH transcription factor 128 191 - -
Acco10g1721 224 Pfam Helix-loop-helix DNA-binding domain 134 175 IPR011598 GO:0046983
Acco10g1721 224 Coils Coil 164 184 - -
Acco10g1721 224 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 45 207 IPR045843 GO:0003700|GO:0006355
Acco10g1721 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 194 IPR036638 GO:0046983
Acco10g1721 224 Gene3D - 124 191 IPR036638 GO:0046983
Acco10g1721 224 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Acco10g1721 224 SMART finulus 131 180 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1721 Acco-ChrAcco10 30495497 30496171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1721 52 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 61.871 5.01e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco10g1721 HLH 2.2e-08 No_clan