Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1718 ATGAGCATCAGGAATGGGATGAACAACCCTGCCGCCGCGGATAACCACGGCGGCGGAAGGCAGCCAGGGAATTTTTCCCTGGCACGACAGCCGTCCGTTTACTCTCTGACCTTCGACGAGTTCATGAGTACCATGGGAGGTCCAGGAAAGGACTTTGGGTCCATGAACATGGACGAGTTGCTCAGGAACATTTGGACAGCTGAAGAAATGCAGACAATGGCGTCAACGAACGGCGATCAACCGGTGACCGGTATCTCTGGTGGTGGCCATTTGCAGAAACAAGGATCGTTGACACTTCCACGGACACTTAGCCAGAAGACGGTGGATGAAGTGTGGAAGGATATTTCCAAGGACGAGATTGCTTCTGGTCCTAATATTCCTCAGAGGCAGCCGACTTTGGGAGAGATGACGCTGGAGGAGTTCTTGGTCAGAGCCGGCGTGGTAAGAGAAGATATACAATTAGGAAATCAAAGGCCTAACGGAGGGATTTTCACCGATTTGAATCTAATAGGGAATCATAGTGGTTTAAGTATCGGTTATCCGCAGTTCAACAATGGAGCAGGGTTAGTGGGAAGCCCAATTTCCGGAAATAACATCGATCGTCTAACTCTCCAATCGCCGACCAATTTGCCATTGAACGTTAACGGGATTAGGTCGAATCAACAAAAGTTGCCTAATTCACAGCCACCGCAGATACTTCCAAAGCAGCCTGCTCTGCCTTGTGCAAATCCAATGCCATTAATGAACAATCAAGAAATCAAGAGCGGAATAGTTGGACTTGCTGATCAGGATCTAAAGGATAATATAGTTTCAGGTTCTGCACTGCAAGGCGGAGGGACCAATGGTATGGGTTTAGGACCTGGGGGTGTTCACGTAGCTACAGGATCGCCGGCGAATCAACTGTCCTGCGACGAAACCGGGAGGATTAATTATGATACTTCGTCAGTATCGCCAGTTCCTTATGTATTCAATGGTGGTTTGAAGGGAAAGAAGAGGAGTGGAGCTGTGGAGAAGGTGATTGAAAGGAGGCAGAAGAGGATGATAAAGAATAGGGAGTCAGCTGCCAGGTCGAGGGCTCGCAAGCAGGCATATACCATGGAATTGGAAGCAGAACTTAAAATGTTAAAAGAAGAAAACGAAGAACTTCGAGGAAAGCAGGAAGAAATCATAGAAAATCGAAGGAAACAAATTATGGGGATGATAAATAAGCACCGAGCAGAGCGTGCAGAGCGACAAGCCAAGAAAGGACGCTTATTAAGACGAACTCAAACTGGACCATGGTAG 1284 0.4774 MSIRNGMNNPAAADNHGGGRQPGNFSLARQPSVYSLTFDEFMSTMGGPGKDFGSMNMDELLRNIWTAEEMQTMASTNGDQPVTGISGGGHLQKQGSLTLPRTLSQKTVDEVWKDISKDEIASGPNIPQRQPTLGEMTLEEFLVRAGVVREDIQLGNQRPNGGIFTDLNLIGNHSGLSIGYPQFNNGAGLVGSPISGNNIDRLTLQSPTNLPLNVNGIRSNQQKLPNSQPPQILPKQPALPCANPMPLMNNQEIKSGIVGLADQDLKDNIVSGSALQGGGTNGMGLGPGGVHVATGSPANQLSCDETGRINYDTSSVSPVPYVFNGGLKGKKRSGAVEKVIERRQKRMIKNRESAARSRARKQAYTMELEAELKMLKEENEELRGKQEEIIENRRKQIMGMINKHRAERAERQAKKGRLLRRTQTGPW 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1718 427 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 340 398 - -
Acco10g1718 427 CDD bZIP_plant_BZIP46 342 389 - -
Acco10g1718 427 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 340 389 IPR004827 GO:0003700|GO:0006355
Acco10g1718 427 Gene3D - 340 396 - -
Acco10g1718 427 SMART brlzneu 338 403 IPR004827 GO:0003700|GO:0006355
Acco10g1718 427 MobiDBLite consensus disorder prediction 1 27 - -
Acco10g1718 427 SUPERFAMILY Leucine zipper domain 342 390 IPR046347 GO:0003700|GO:0006355
Acco10g1718 427 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 427 IPR043452 GO:0003700|GO:0045893
Acco10g1718 427 MobiDBLite consensus disorder prediction 406 427 - -
Acco10g1718 427 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 345 360 IPR004827 GO:0003700|GO:0006355
Acco10g1718 427 Pfam bZIP transcription factor 342 393 IPR004827 GO:0003700|GO:0006355
Acco10g1718 427 Coils Coil 358 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1718 Acco-ChrAcco10 30475716 30478754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1718 14 427 bZIP Transcription Factor Family AT1G49720 43.619 4.39e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco10g1718 bZIP_1 5.6e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1718 10 30475716 30478754 Acco10g1718 10 30475716 30478754 ECH