Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1704 ATGTCAACCAAGAGTGAACACCAAACGGTTCCCCTTTCGGTGCTCCTGAAGCGTGAATCAGCAAGCGAGAAAATTGAAAAACCTGAAATTCAGCATGGTCAAGCAAGCGAGAGCAAAAAGGGAGAGGACTTCACGCTACTAAAAACGGAATGCCAGAGGGTGGTGGGGGACGGGGTATCGACATATTCTGTTTTCGCACTATTTGATGGACACAAAGGATCTGCTGCCGCTGTTTATTCCAAGGAGAATCTCCTAAATAATGTTTTAAGTGTGATCCCTTCGGATCTTAACAGAGATGAGTGGATAGCAGCTTTGCCTAGGGCTTTAGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGACAGGTCAAACATCAGGAACAACTGTGACCTTTGTGATTATAGAAGGATGGGTTGTCACGGTTGCATCTGTTGGTGATTCCCGATGCATACTTGAACCCTCTGAAGGTGGTCTTTACTACCTATCAGCGGATCATAGGCTAGACACCAATGAAGAGGAGGTAACACGTATATCAAGTAGTGGGGGTGAGGTTGGTCGGCTAAATACTGGCGGTGGTGCAGAGATTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCAAGATCTATTGGTGATATGGATGTTGGACAATTTATTGTTCCTATACCTTACGTAAAGCAAGTGAAGCTGTCCACATCCGGAGGCAGGCTTCTCATCTGCAGTGACGGTGTTTGGGATGCTCTAGCTGCAGAAACAGCCCTTGATTGTTGTCGTGGGATGTCCACGGAGGTTGCAGCACTACAAATCGTTAGAGAAGCGGTACACGCAAAGGGACTTAGAGATGATACAACCTGCATTGTTATTGATATTTTGCCCCCCGAGAAACCACCTGCTCCTCCTTTGACATATGCTAAGAGACCAATGAAAGGAATGTTTAAATCCGTGTTTCGGAGGAAGTCTGCAGAATCATCTTCCTATAATGAAAAAGATTATATGGAGCCTGATGTGGTATTGGAGCTGTACGAGGAAGGATCTGCTATGCTTTCAGAGAGATTAGATACAAAATATCCACTCTGCAACATGTTCAGGTTGTTTACATGTGCAGTCTGTCAAGTTGAGATGAAGCCTGGGGAGGGCATATCAATACACGAAGAGGCATCCAACCCAGGAAAATTGCGTCCCTGGGATGGTCCATTCCTTTGCCGAAGTTGCCAAGACAAAAAAGAAGCCATGGAAGGGAAAAAGAAAAATAGGTAG 1266 0.4518 MSTKSEHQTVPLSVLLKRESASEKIEKPEIQHGQASESKKGEDFTLLKTECQRVVGDGVSTYSVFALFDGHKGSAAAVYSKENLLNNVLSVIPSDLNRDEWIAALPRALVAGFVKTDKDFQETGQTSGTTVTFVIIEGWVVTVASVGDSRCILEPSEGGLYYLSADHRLDTNEEEVTRISSSGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGQFIVPIPYVKQVKLSTSGGRLLICSDGVWDALAAETALDCCRGMSTEVAALQIVREAVHAKGLRDDTTCIVIDILPPEKPPAPPLTYAKRPMKGMFKSVFRRKSAESSSYNEKDYMEPDVVLELYEEGSAMLSERLDTKYPLCNMFRLFTCAVCQVEMKPGEGISIHEEASNPGKLRPWDGPFLCRSCQDKKEAMEGKKKNR 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1704 421 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Acco10g1704 421 Pfam Protein phosphatase 2C 53 277 IPR001932 -
Acco10g1704 421 MobiDBLite consensus disorder prediction 19 38 - -
Acco10g1704 421 SMART PP2C_4 21 291 IPR001932 -
Acco10g1704 421 MobiDBLite consensus disorder prediction 1 38 - -
Acco10g1704 421 Gene3D - 32 298 IPR036457 -
Acco10g1704 421 FunFam probable protein phosphatase 2C 12 32 299 - -
Acco10g1704 421 CDD PP2Cc 39 293 IPR001932 -
Acco10g1704 421 PANTHER PROTEIN PHOSPHATASE 26 292 IPR015655 GO:0004722|GO:0006470
Acco10g1704 421 SMART PP2C_SIG_2 46 293 IPR001932 -
Acco10g1704 421 SUPERFAMILY PP2C-like 38 293 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1704 Acco-ChrAcco10 30389493 30393808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1704 1 420 PP2C-type Phosphatase Gene Family AT1G47380 77.014 0.0 686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1898 05 35362264 35366531 Acco10g1704 10 30389493 30393808 CCT
Acco10g1704 10 30389493 30393808 Acco10g1704 10 30389493 30393808 ECH