Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1683 ATGGAACCAGTCACCAATAGATGTTCCTCTTCCACTTCTTCCTCTGACTCTTCCACTTCTGGCTCTTCCTTTTCCAGCAACCCCCATACCAACAACCCCGACAGAATCAAAGGTCCCTGGAGTGCTGAAGAAGACCGCATTCTTACTCGACTTGTTGAACGATACGGGCCCCGAAACTGGTCCTTGATTAGCCGCCACATTAAGGGAAGGTCCGGCAAGTCATGCCGCCTCAGATGGTGTAACCAGCTGAGCCCCACTGTTGAGCACCGTCCCTTTTCCCAACAAGAGGACGACACCATCATTGCCGCTCATGCTCAGTACGGTAACAGGTGGGCCACCATCGCCCGCCTCCTCCCTGGTCGGACCGATAATGCCGTCAAGAACCACTGGAATTCCACGCTCAAGAGGAGGGTGAGGGAGCAGCGTGCGGCGCCGGACGGTGGAGCTTCTGGTGCTGCTGCTGCTGCCCACGAGAGGGTTCTTAATTCTCCGGGATCTTCGCAGCCCTGCATGGGATTCGAAATGGAAAATGACCCGTTGACGGCGTTGACTCTGGCGCCGCCTGGTGCTAACATGGCAGTGGTGGCTGAGCGCCAGCCGAGTTCTGATAATGTGCCGGCGGGGTTCTGGGATGTGATGAGGGGTGTGATATCGAGGGAAGTCAGAGACTATGTTTCTTCCACTTTTTCTGAAAATCCAGGATTCCATTGA 711 0.5541 MEPVTNRCSSSTSSSDSSTSGSSFSSNPHTNNPDRIKGPWSAEEDRILTRLVERYGPRNWSLISRHIKGRSGKSCRLRWCNQLSPTVEHRPFSQQEDDTIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVREQRAAPDGGASGAAAAAHERVLNSPGSSQPCMGFEMENDPLTALTLAPPGANMAVVAERQPSSDNVPAGFWDVMRGVISREVRDYVSSTFSENPGFH 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1683 236 CDD SANT 39 81 IPR001005 -
Acco10g1683 236 MobiDBLite consensus disorder prediction 1 34 - -
Acco10g1683 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 138 IPR017930 -
Acco10g1683 236 MobiDBLite consensus disorder prediction 1 41 - -
Acco10g1683 236 CDD SANT 91 134 IPR001005 -
Acco10g1683 236 SMART sant 88 136 IPR001005 -
Acco10g1683 236 SMART sant 36 85 IPR001005 -
Acco10g1683 236 Gene3D - 36 88 - -
Acco10g1683 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 87 IPR017930 -
Acco10g1683 236 FunFam MYB transcription factor 37 88 - -
Acco10g1683 236 Pfam Myb-like DNA-binding domain 40 98 - -
Acco10g1683 236 SUPERFAMILY Homeodomain-like 34 130 IPR009057 -
Acco10g1683 236 PANTHER MYB PROTEIN-RELATED 37 167 - -
Acco10g1683 236 Gene3D - 90 150 - -
Acco10g1683 236 ProSiteProfiles Myb-like domain profile. 84 134 IPR001005 -
Acco10g1683 236 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1683 Acco-ChrAcco10 30225969 30226679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1683 26 152 MYB Transcription Factor Family AT4G37260 69.291 2.67e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco10g1683 Myb_DNA-bind_6 2e-17 CL0123