Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1675 ATGGCTATCCGAGTAACTTTATCCTACTCCAGCTACTTTGCCCAGGGCCTGGCTTCCGCCGGTTGTCGGGCTGGTAATTCGCGCTCCCTCCAAGAATGTTGGATCCGATCTCGTTTGTTCGGCCCTTGCCAGAAACTTGATCGTGATCCTTCCGGAGGCGTGCGTAATTACCGTTCCTATTATGGGCGGCCTAAACCTAATTGCTGGGCTAAGCATTCAGCCTCTCTGTATTCTACCATCTCCAGAGAATATCTGGGAGATAATTCTGATAATCCGATCATATTGGGTTTGATTTCGCTATTGAAGTCAACCGGTTCGGTATCGGCGTCTATGGCTGTATCTGGTGTTTCCCCGATTAACGCCTCTTCGATTGTGCCCTTTTTAAGGGGATCGAAGAGCCTTCCCAGTAACGAGTCAACTCCCGTTCCTGCAACTCTTGAGGTGGATAAAGGAGGGACGCTAATTTATAATGGCAGTGATGATGCGAATTCAGGGTACAATCCCAAAGGTCTTGAGAAGTCGAGCTGGCTATCGCGCTTGTTGAATGTCTGTTCAGAGGATGCGAAGGCTGTGTTTACTGCTGTGACTGTTAGTGTGCTCTTTAAGTCGTTCTTGGCTGAGCCGAGATCGATCCCCTCGGCTTCTATGTACCCAACTCTGGACGTGGGTGACCGAATTTTAGCGGAGAAGGTTTCATTCCTTTTCCGAAAGCCTGATGTTTCAGATATTGTCATTTTTAAAGCACCTCCAAGTTTACAGGAAAAAGGTTTTAGTTCGGTTGATGCATTTATTAAGAGAATTGTGGCAAAAGCTGGGGACTGCGTGGAGGTTCGTGATGGAAAACTGTTGGTGAATGGTGTTGCTCAGGAAGAAGAATTCGTTTTAGAGCCCCTTTCTTATGAGATGGATCCAGTGCTTGTGCCAGAAGGTTATGTCTTTGTGTTGGGTGACAATCGTAATAATAGCTATGACTCTCATAACTGGGGTCCGCTTCCTATAAAGAACATTGTGGGTAGATCCATGTTTCGGTACTGGCCTCCTTCTAAAGTATCTGACACCCTTGATAAATCACCAAGTGCAAACAATTCTCTGGCTGTTTCTTGA 1104 0.4656 MAIRVTLSYSSYFAQGLASAGCRAGNSRSLQECWIRSRLFGPCQKLDRDPSGGVRNYRSYYGRPKPNCWAKHSASLYSTISREYLGDNSDNPIILGLISLLKSTGSVSASMAVSGVSPINASSIVPFLRGSKSLPSNESTPVPATLEVDKGGTLIYNGSDDANSGYNPKGLEKSSWLSRLLNVCSEDAKAVFTAVTVSVLFKSFLAEPRSIPSASMYPTLDVGDRILAEKVSFLFRKPDVSDIVIFKAPPSLQEKGFSSVDAFIKRIVAKAGDCVEVRDGKLLVNGVAQEEEFVLEPLSYEMDPVLVPEGYVFVLGDNRNNSYDSHNWGPLPIKNIVGRSMFRYWPPSKVSDTLDKSPSANNSLAVS 367
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1675 367 ProSitePatterns Signal peptidases I serine active site. 213 220 IPR019756 GO:0004252|GO:0016020
Acco10g1675 367 FunFam Peptidase/ serine-type peptidase 213 344 - -
Acco10g1675 367 Pfam Signal peptidase, peptidase S26 188 345 IPR019533 GO:0004252|GO:0006465
Acco10g1675 367 ProSitePatterns Signal peptidases I signature 3. 312 325 IPR019758 GO:0004252|GO:0016020
Acco10g1675 367 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Acco10g1675 367 NCBIfam signal peptidase I 190 346 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g1675 367 PANTHER SIGNAL PEPTIDASE I 142 352 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g1675 367 Gene3D Umud Fragment, subunit A 201 358 - -
Acco10g1675 367 CDD S26_SPase_I 207 339 IPR019533 GO:0004252|GO:0006465
Acco10g1675 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 204 220 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g1675 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 307 326 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g1675 367 PRINTS Bacterial leader peptidase 1 (S26A) family signature 263 275 IPR000223 GO:0006508|GO:0008236|GO:0016020
Acco10g1675 367 SUPERFAMILY LexA/Signal peptidase 203 351 IPR036286 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco10g1675 Acco-ChrAcco10 30172826 30175109 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1675 216 346 MADS-box Gene Family AT1G29960 34.586 1.29e-15 70.9
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1675 10 30172826 30175109 Acco10g1675 10 30172826 30175109 ECH