Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco10g1675 | ATGGCTATCCGAGTAACTTTATCCTACTCCAGCTACTTTGCCCAGGGCCTGGCTTCCGCCGGTTGTCGGGCTGGTAATTCGCGCTCCCTCCAAGAATGTTGGATCCGATCTCGTTTGTTCGGCCCTTGCCAGAAACTTGATCGTGATCCTTCCGGAGGCGTGCGTAATTACCGTTCCTATTATGGGCGGCCTAAACCTAATTGCTGGGCTAAGCATTCAGCCTCTCTGTATTCTACCATCTCCAGAGAATATCTGGGAGATAATTCTGATAATCCGATCATATTGGGTTTGATTTCGCTATTGAAGTCAACCGGTTCGGTATCGGCGTCTATGGCTGTATCTGGTGTTTCCCCGATTAACGCCTCTTCGATTGTGCCCTTTTTAAGGGGATCGAAGAGCCTTCCCAGTAACGAGTCAACTCCCGTTCCTGCAACTCTTGAGGTGGATAAAGGAGGGACGCTAATTTATAATGGCAGTGATGATGCGAATTCAGGGTACAATCCCAAAGGTCTTGAGAAGTCGAGCTGGCTATCGCGCTTGTTGAATGTCTGTTCAGAGGATGCGAAGGCTGTGTTTACTGCTGTGACTGTTAGTGTGCTCTTTAAGTCGTTCTTGGCTGAGCCGAGATCGATCCCCTCGGCTTCTATGTACCCAACTCTGGACGTGGGTGACCGAATTTTAGCGGAGAAGGTTTCATTCCTTTTCCGAAAGCCTGATGTTTCAGATATTGTCATTTTTAAAGCACCTCCAAGTTTACAGGAAAAAGGTTTTAGTTCGGTTGATGCATTTATTAAGAGAATTGTGGCAAAAGCTGGGGACTGCGTGGAGGTTCGTGATGGAAAACTGTTGGTGAATGGTGTTGCTCAGGAAGAAGAATTCGTTTTAGAGCCCCTTTCTTATGAGATGGATCCAGTGCTTGTGCCAGAAGGTTATGTCTTTGTGTTGGGTGACAATCGTAATAATAGCTATGACTCTCATAACTGGGGTCCGCTTCCTATAAAGAACATTGTGGGTAGATCCATGTTTCGGTACTGGCCTCCTTCTAAAGTATCTGACACCCTTGATAAATCACCAAGTGCAAACAATTCTCTGGCTGTTTCTTGA | 1104 | 0.4656 | MAIRVTLSYSSYFAQGLASAGCRAGNSRSLQECWIRSRLFGPCQKLDRDPSGGVRNYRSYYGRPKPNCWAKHSASLYSTISREYLGDNSDNPIILGLISLLKSTGSVSASMAVSGVSPINASSIVPFLRGSKSLPSNESTPVPATLEVDKGGTLIYNGSDDANSGYNPKGLEKSSWLSRLLNVCSEDAKAVFTAVTVSVLFKSFLAEPRSIPSASMYPTLDVGDRILAEKVSFLFRKPDVSDIVIFKAPPSLQEKGFSSVDAFIKRIVAKAGDCVEVRDGKLLVNGVAQEEEFVLEPLSYEMDPVLVPEGYVFVLGDNRNNSYDSHNWGPLPIKNIVGRSMFRYWPPSKVSDTLDKSPSANNSLAVS | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco10g1675 | 367 | ProSitePatterns | Signal peptidases I serine active site. | 213 | 220 | IPR019756 | GO:0004252|GO:0016020 | |
Acco10g1675 | 367 | FunFam | Peptidase/ serine-type peptidase | 213 | 344 | - | - | |
Acco10g1675 | 367 | Pfam | Signal peptidase, peptidase S26 | 188 | 345 | IPR019533 | GO:0004252|GO:0006465 | |
Acco10g1675 | 367 | ProSitePatterns | Signal peptidases I signature 3. | 312 | 325 | IPR019758 | GO:0004252|GO:0016020 | |
Acco10g1675 | 367 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | - | - | |
Acco10g1675 | 367 | NCBIfam | signal peptidase I | 190 | 346 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Acco10g1675 | 367 | PANTHER | SIGNAL PEPTIDASE I | 142 | 352 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Acco10g1675 | 367 | Gene3D | Umud Fragment, subunit A | 201 | 358 | - | - | |
Acco10g1675 | 367 | CDD | S26_SPase_I | 207 | 339 | IPR019533 | GO:0004252|GO:0006465 | |
Acco10g1675 | 367 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 204 | 220 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Acco10g1675 | 367 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 307 | 326 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Acco10g1675 | 367 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 263 | 275 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Acco10g1675 | 367 | SUPERFAMILY | LexA/Signal peptidase | 203 | 351 | IPR036286 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco10g1675 | Acco-ChrAcco10 | 30172826 | 30175109 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco10g1675 | 216 | 346 | MADS-box Gene Family | AT1G29960 | 34.586 | 1.29e-15 | 70.9 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco10g1675 | 10 | 30172826 | 30175109 | Acco10g1675 | 10 | 30172826 | 30175109 | ECH |