Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1671 ATGTTCACTGCCTCTCGGTCACACCCAGTAATGAGAAGCTTAACACCATTCCCTGACCTTTCCTTGAACATCAGCCCTCCAGATTATGAAGCCAAACAAGCTGTTGAGAGTTACACTAAAACGCCTCATCATCATCACAGCGAAATGTGTTCCACCTCCGATTCTGGAAGCAGTGAGAGTGATTTAAGCCATGAAAATGCCTTCTCACACCTTGGCTATTATCATCATAATCGCGAGCCTACTTTGAGCTTAGGCATCAAAACGGCAGATTTGAATCCCCTTAATAATCCCCTCCCAGCAAGAAACGCGATTAATCACTTTCACAACCCCAAACCTCACATCTATGGCCGCGACTTTAAACGAAACACAACCAAAGTCCTCTCTGCTGGTGGTGTTAAAAGAAGCATCAGAGCTCCTAGAATGCGATGGACTACAACCCTACATGCTCATTTTGTTCACGCCGTTCAGCTTCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCGGTGTTAGAGTTGATGAATGTAAAAGATTTAACCCTAGCCCACGTTAAGAGTCATTTACAGATGTATAGAACAGTGAAGAGTACTTCCAAATGTACAGGTCATGGCCTCACTGATATGGGCTTAGCCGTTGCTGATGAACATGGAGCCGAAGCTTGTGTCAGAACCCATCTAACTCCGCCTCTTCAAAAATCTCACAGCAACAAGGAATCAAAGCAATCATCAACGGAGACAAGGACAAACGAGAGTAGACAAAAACCTGGAACGAGTTTGACGTATTCTCAAGTGAAAGCAAATGAAAGCATGGTGGTTGGAGGGTCATTGTCGGATTCTTCAGATGAGACGCTTAACCTAGAATTCACCCTTGGAAGACCCAGTTGGAACACACAGCAACCTCAATCATCAACAGACTTAACTCTTCTCAATTGTTAA 933 0.4459 MFTASRSHPVMRSLTPFPDLSLNISPPDYEAKQAVESYTKTPHHHHSEMCSTSDSGSSESDLSHENAFSHLGYYHHNREPTLSLGIKTADLNPLNNPLPARNAINHFHNPKPHIYGRDFKRNTTKVLSAGGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTSKCTGHGLTDMGLAVADEHGAEACVRTHLTPPLQKSHSNKESKQSSTETRTNESRQKPGTSLTYSQVKANESMVVGGSLSDSSDETLNLEFTLGRPSWNTQQPQSSTDLTLLNC 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1671 310 MobiDBLite consensus disorder prediction 37 63 - -
Acco10g1671 310 SUPERFAMILY Homeodomain-like 136 193 IPR009057 -
Acco10g1671 310 Gene3D - 138 195 - -
Acco10g1671 310 Pfam Myb-like DNA-binding domain 140 191 IPR001005 -
Acco10g1671 310 MobiDBLite consensus disorder prediction 224 257 - -
Acco10g1671 310 FunFam Myb family transcription factor 137 195 - -
Acco10g1671 310 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 297 IPR044847 GO:0000976|GO:0006355|GO:0010158
Acco10g1671 310 MobiDBLite consensus disorder prediction 291 310 - -
Acco10g1671 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 139 192 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1671 Acco-ChrAcco10 30143060 30146020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1671 11 198 G2-like Transcription Factor Family AT5G42630 55.959 2.50e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco10g1671 Myb_DNA-binding 1.3e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2835 05 43402698 43404982 Acco10g1671 10 30143060 30146020 CCT
Acco10g1671 10 30143060 30146020 Acco10g1671 10 30143060 30146020 ECH