LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco10g1657	ATGTTGAGGGATGAGATTGTCGGTTCAAGGAGCGCGAGGCATAGCGCCACCGTGTCTGCGGAATCAAATAAAGTTCTGGTGGCCGTGAAGGCGGAGAGGGTGATCTCCAAGACCGCATTGACCTGGGCACTCACTCATGTCGTTCGCTCCAGTGATTGCATCACGCTGCTGGCTGTATACTGTGGCGAGAAAACTGGCAGAAGACTCTGGAATTTTTCGAGATTGGGAGGAGATTGCACGAATGGACGCCGGGAAAATTTGCCGGAGCGGATTCATGAAATCTCCGACTCTTGTGCGCAGATGGTGCTTCAGTTGCACAATCAGACTGAGGTGAGGGTGAAGATCAAGGTGGTCACGGGGACACCCAGTGGTGCGGTGGCAACTGAAGCAAGATGCAGTGGGTCTAATTGGGTCATACTGGACAAGAAGTTGAAACAAGAGGTGAAGCATTGCATGGATGAACTCCACTGTAGTATCGTGGTGATGAATGGTTCGCAGCCAAAAGTTTTAAGGCTTCATTTAGGGTCCTCTAATGAATTCCAAAGCCCCACCTTTTCTGCTGCCTCTTCCCCGGGAATAGATATTGCTAAGCTACGAGGACACCGATTAAAGCCCTCCACCCCAGTCAGTAGCCCTGAAGAAGTAACTACTTCCAATACAACATCTATTCTAGTAAACTCAGGGTCATCTTCTGACACTATAACTTCTTTTTTCCTTGTCTATGACCAAAATCCTCTGTTCGAGGGTCAGGGTCCAGATAGAAGGAACCAGAGACCAATCAATGTACCAAAAAATTTCAACCGCCAGCCCCCATTAGCATTTGAACTGGACAGGGAAAGGACTCTCAGTTTGACCAAATCCCCGGTATCATCTGTGGTTAGTGACGAGAAAAGTGTGTTTTGGAGTCCTCAAACTCACCTTGTCGATGAGAAGCCTCAAATAACAGAGAACACTGGAAGTAGTCGTAGATCGAAATCTCCTACTTCTAAAACTTTACTAGAAAGATTTGTGCATTGTGATCAGGAGTTGTGGAGTGATGAAGTAGGACATAAGCAAGCTCAAAGTGGGAATCATGTTTTGAAATCAGAACTTCCTGCAGTCAGAACTTCCTCAATACCTCCTCCCCTATGCTCACACTGTCAAAACAAAGCACCAGTTTTTGGAAAACCTCCTAGACGCTTCCATTACAAAGAAATAGAGGAAGCCACTGATATGTTTTCAGACATAAATTTTTTGGCTGAAGGTGGATTTGGGACAGTTCACAAGGGAGTGCTACGAGATGGCCAGGTCGTTGCAGTGAAACAGTTAAAGTTTAGTGGCTCTCAGGCAGATCTTGATTTCTGTAGGGAGGTTCGAGTATTGAGCTGCGCACAACACAGAAATGTTGTGCTGTTGATAGGATTCTGCGTAGAAGGCAATTTGAGGCTATTAGTCTATGAGTACATATGCAATGGATCCTTAGAGCTCTATCTTCATGGAAAGAACAGAGGCGCTCTAGATTGGAACTCGCGCTTAAAGATAGCAATAGGAGCTGCACGAGGCCTACGCTACCTTCATGAGGATTGTAGAATGGGCTGTATAGTGCACAGAGACTTTCGACCCAGGAATATCCTCTTAACCCATGATTTAGAACCTGTGGTAGCGGATTTTGGCCTTGCAAGGTGGCAATCAGAATGGAACACAAATGCTGATGATCGAGTTGTTGGAACTTCAGGGTATCTTGCACCGGAGTATCTTGATGCTGGAAATCTTACATACAAAGTAGATGTGTATGCATTTGGAATTGTCTTGTTAGAGTTACTAACAGGTCGAAGAATCAGTGAGTTTGAAGATAATAACGGACCCTCGTTTCTTTCCGGATTTTTTCAACCCCTGCTCATGGTAGAACCCAATCATATTTTAGAAAACCTCCAAATTCTGAATCCATGCTTGGAGCTTGAGTCGTCACAGGAATTTAATCTTCAGTTACAAGCAATGGCCCGTGCTGCTTCCTTGTGTCTTCGTCTAGATCCTGATGCCAGGCCCCCAATGTCGAAGATCCTCAGAATGCTGGAAGGGGGCGATCCAGCTCGTCCAATTGGTTTAGACCTAAACTCAGTTGGTAACACAAGCGGGCGTTTAAGTGGATTGAAATCCCACACTCAACCTAAAGGCACAAGAAGCCACTCCCGCAGGCTCTCACATTGA	2187	0.4595	MLRDEIVGSRSARHSATVSAESNKVLVAVKAERVISKTALTWALTHVVRSSDCITLLAVYCGEKTGRRLWNFSRLGGDCTNGRRENLPERIHEISDSCAQMVLQLHNQTEVRVKIKVVTGTPSGAVATEARCSGSNWVILDKKLKQEVKHCMDELHCSIVVMNGSQPKVLRLHLGSSNEFQSPTFSAASSPGIDIAKLRGHRLKPSTPVSSPEEVTTSNTTSILVNSGSSSDTITSFFLVYDQNPLFEGQGPDRRNQRPINVPKNFNRQPPLAFELDRERTLSLTKSPVSSVVSDEKSVFWSPQTHLVDEKPQITENTGSSRRSKSPTSKTLLERFVHCDQELWSDEVGHKQAQSGNHVLKSELPAVRTSSIPPPLCSHCQNKAPVFGKPPRRFHYKEIEEATDMFSDINFLAEGGFGTVHKGVLRDGQVVAVKQLKFSGSQADLDFCREVRVLSCAQHRNVVLLIGFCVEGNLRLLVYEYICNGSLELYLHGKNRGALDWNSRLKIAIGAARGLRYLHEDCRMGCIVHRDFRPRNILLTHDLEPVVADFGLARWQSEWNTNADDRVVGTSGYLAPEYLDAGNLTYKVDVYAFGIVLLELLTGRRISEFEDNNGPSFLSGFFQPLLMVEPNHILENLQILNPCLELESSQEFNLQLQAMARAASLCLRLDPDARPPMSKILRMLEGGDPARPIGLDLNSVGNTSGRLSGLKSHTQPKGTRSHSRRLSH	728

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco10g1657	728	SUPERFAMILY	Protein kinase-like (PK-like)	386	684	IPR011009	-
	Acco10g1657	728	Gene3D	Transferase(Phosphotransferase) domain 1	482	690	-	-
	Acco10g1657	728	FunFam	Os07g0541700 protein	482	570	-	-
	Acco10g1657	728	MobiDBLite	consensus disorder prediction	203	225	-	-
	Acco10g1657	728	PANTHER	OS01G0750732 PROTEIN	264	688	-	-
	Acco10g1657	728	Gene3D	HUPs	9	179	IPR014729	-
	Acco10g1657	728	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	378	481	-	-
	Acco10g1657	728	MobiDBLite	consensus disorder prediction	248	268	-	-
	Acco10g1657	728	Gene3D	Phosphorylase Kinase; domain 1	373	481	-	-
	Acco10g1657	728	MobiDBLite	consensus disorder prediction	310	329	-	-
	Acco10g1657	728	ProSiteProfiles	Protein kinase domain profile.	406	691	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco10g1657	728	MobiDBLite	consensus disorder prediction	209	225	-	-
	Acco10g1657	728	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	527	539	IPR008266	GO:0004672\|GO:0006468
	Acco10g1657	728	MobiDBLite	consensus disorder prediction	704	728	-	-
	Acco10g1657	728	Pfam	Protein tyrosine and serine/threonine kinase	411	683	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco10g1657	Acco-ChrAcco10	29994964	30000205	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco10g1657	394	685	Trihelix Transcription Factor Family	AT5G38560	43.098	1.22e-71	245

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Acco10g1657		PK_Tyr_Ser-Thr	4.2e-42	CL0016