Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1650 ATGCCCAAGCTTCCAATAATCTATCGAGTAATCATTATCTTTGAAAGAATGAAACAGTTCCTCATACCTCTCTTCATCCTATACGTGGCATCTTCAAATGCTAGAGCAGAGCAGAATTACTCAGGAAACTCAGTGCTCGACTGCAACATGAACGATCAAAACGGGCCATCATCTGCTTTCCTTTACACTTGCAATGGCCTTAGCAAATCGTGTTTGACCTTCCTCATCTTCCAGTCCCAACCTCCTTTCAACACCATTACCTCAATTGCTAACCTGACATCAGCGGACCCAGAAAAGCTCGCTACAGTCAACAACGTTTCTGTGTTCACTCTGTTCCCAACAGGCAAAGAGGTAATTGTCCCTGTAAACTGTTACTGCAAAACTAAGGACTATTACCAAGCTGATACCAATTATACCTTGCCCACAATCCAAACTTATTTCACAATAGCAAACAACACTTTTGAGGGATTGTCCACTTGTAATTCTCTCTTGCGTTTCAATCCATATGGGGCTTTAGACTTGCATGCTGGGATGCAGTTACAAGTGCCTCTCCGATGTGCCTGTCCAACTCAGTCTCAAATTGAAAGTGGCACCAAATATTTACTGACTTACCCAGTTGATTGGGGTGATAATGTCTCATCTCTTGCTGCAAGATTCAAAGTGAGTTCAAGTTCTGTACTAGAAGCTAATGTTATTACCACACCCACTCTTTATCCATTCACAACTCTTCTGATTCCTTTACCTGGTGAACCTGATAGTTCAACCACCATAGTTCATTCTGGTAGACCACCAACTATTTCTCCTCCCGTTCCCCCCACCAAACAAAGCAAGAAGGCAAAAACAAAACTCTATGTTGCTGTTGGCACCACAGGAGGGTTTTTGCTTGTTGTGTGTGTGATTTTGTTTTCTGTATTTCTAATGAGGAAGAGTTCGGCGGCGACTTCCGTTGAGGCAGGTAAAACCAAGTCTTCAGAAGATATTCGAGACGAGATTGCAGGGATTGAGCATGTTTCTAAAGAGTACAGATTTGAGGAGATAAAAGAGGCGACTGAGAATTTCAGTTCAGAGAATAGAATTGGAGGTTCTGTGTACAGGGGATTGTTTGGCAAGGATATCTTGGCTGTCAAGAAAATGAGTTCAGATGCGTCCAAAGAAGTGAATATGCTGAAGAAGATCAATCACTTCAACGTCATAAAACTTCAAGGGTACTGTAAATACGAAGGCTTCTTCTACCTAGTTTTCGAATACATGGAAAATGGTTCTCTAAGAGAGTGGCTAGAAAAAAACATAACCATGGAGCACCAGAATTGGGCCAAGAGGATCCAGATTGCTCTGGATATTGCCAATGGACTTCAATATCTTCACAACTTCACTGAACCTTGCCATGTGCACAAGGACATCAACACTAGCAACATTCTACTGAACAAGGACGCGAGGGCCAAGATTGCGAATTTTCGCCTCGCAGAAGAATCAGAAGGGGATAATATAACTTGCACATCACAGGTGGCGGGAACTAGAGGCTATATGGCTCCAGAGTATCTAGAAGCAGGATTGGTTAGTCCCAAAATGGACGTGTACGCCTTTGGAGTGGTTTTGCTGGAACTGATCACAGGGAAAGATCCTATCATTTTACAAGCTGGAACTGAAGTAATGCTTTCTACAGTCATAGGGTCTGTGATGGCAAAGGACGATGCAGAAGCTAATCTTAGTTCATTCATTGATCCTAGCCTTGTTGGAAGCAGTGTGGAAGCATGTGCTTTTGAGCTAGCTAAAATAAGTGTCCACTGCTTGATCCGAGAACCAGCAAGGAGACCAAGCATGGGAGACATAGTTTCTAGCTTGTTAAGGATACAGAGGAATGTGCCTCCAAGAATATCACTCACCATGAATAGCAACAGTCCACGCATGGGGAGATGA 1917 0.4304 MPKLPIIYRVIIIFERMKQFLIPLFILYVASSNARAEQNYSGNSVLDCNMNDQNGPSSAFLYTCNGLSKSCLTFLIFQSQPPFNTITSIANLTSADPEKLATVNNVSVFTLFPTGKEVIVPVNCYCKTKDYYQADTNYTLPTIQTYFTIANNTFEGLSTCNSLLRFNPYGALDLHAGMQLQVPLRCACPTQSQIESGTKYLLTYPVDWGDNVSSLAARFKVSSSSVLEANVITTPTLYPFTTLLIPLPGEPDSSTTIVHSGRPPTISPPVPPTKQSKKAKTKLYVAVGTTGGFLLVVCVILFSVFLMRKSSAATSVEAGKTKSSEDIRDEIAGIEHVSKEYRFEEIKEATENFSSENRIGGSVYRGLFGKDILAVKKMSSDASKEVNMLKKINHFNVIKLQGYCKYEGFFYLVFEYMENGSLREWLEKNITMEHQNWAKRIQIALDIANGLQYLHNFTEPCHVHKDINTSNILLNKDARAKIANFRLAEESEGDNITCTSQVAGTRGYMAPEYLEAGLVSPKMDVYAFGVVLLELITGKDPIILQAGTEVMLSTVIGSVMAKDDAEANLSSFIDPSLVGSSVEACAFELAKISVHCLIREPARRPSMGDIVSSLLRIQRNVPPRISLTMNSNSPRMGR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1650 638 Gene3D LysM domain 201 246 IPR036779 -
Acco10g1650 638 SUPERFAMILY Protein kinase-like (PK-like) 338 616 IPR011009 -
Acco10g1650 638 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 21 620 - -
Acco10g1650 638 MobiDBLite consensus disorder prediction 254 274 - -
Acco10g1650 638 FunFam PTI1-like tyrosine-protein kinase 3 417 624 - -
Acco10g1650 638 Gene3D Transferase(Phosphotransferase) domain 1 417 628 - -
Acco10g1650 638 Pfam Protein tyrosine and serine/threonine kinase 378 614 IPR001245 GO:0004672|GO:0006468
Acco10g1650 638 CDD LysM 203 245 IPR018392 -
Acco10g1650 638 Pfam LysM domain 209 246 IPR018392 -
Acco10g1650 638 ProSiteProfiles LysM domain profile. 202 245 IPR018392 -
Acco10g1650 638 Gene3D Phosphorylase Kinase; domain 1 312 416 - -
Acco10g1650 638 ProSiteProfiles Protein kinase domain profile. 302 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1650 Acco-ChrAcco10 29925112 29927028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1650 20 617 Receptor kinase-like Gene Family AT2G23770 40.354 2.34e-132 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco10g1650 PK_Tyr_Ser-Thr 5.6e-39 CL0016