Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1633 ATGGCGGAACTTGAGAATCCATCTTCAATGGCAGTTTCTACAGCTTCCGGAGAAGCTAGCCTTTCATCCTCTGGCGGTCAGAACGAATCTGAGGAACTCCCTCCCCCGAAAAAGAAGCGAAACCTCCCTGGAATGCCGGATCCAGATGCCGAGGTGATTGCTTTATCGCCCAAAGCACTGTTGGCGACGAACCGTTTTGTATGCGAGATCTGCAGTAAAGGATTTCAACGAGACCAAAACCTGCAACTTCATCGACGCGGCCACAACCTGCCATGGAAACTACGGCAGCGAACCAGCAAGGATATTCGAAAGAGAGTCTACGTGTGCCCCGAGCCTTCCTGTGTCCACCATAACCCGTCGAGGGCGCTAGGTGATCTTACCGGCATCAAGAAGCATTTCTGTAGGAAACATGGCGAAAAGAAGTGGAAGTGTGAGCGTTGCTCCAAGAAATACGCCGTACAGTCCGATTGGAAGGCTCATATGAAAACTTGCGGAACTAGAGAGTACAAATGTGACTGTGGCACCTTATTCTCTAGGAGGGATAGCTTCATTACCCATAGGGCCTTTTGCGATGCTTTGGCGGAAGAAAGCGCCAGAACCCGAACGCTAACCATTGCTGAAGGGTCTGAAGGGAATTCGAATGCGAAGGTTGCTATGGCTTCGCCACCGCAGCCTCCACTAACTCCGTCAACGTCTGTGGTGTCTCCAGCTTTGTCCATTCAGAGCTCAGAAGTTTCCGAAAACCCAATCAGGTTGTCGCCGCCGTCCTCGAATGTAACATGTTTACCAGCAACCACCGTCGCAAACAGTACTCCCTCCAGTTCTACCACAGTTTTCGCCAGTATATTTGCATCCTCAAGTGCTGCTCCTTCCCAAGCCTCGTCAATACTTTCATCTTATTCGAATATGACGTCTAACTTGGCTCGTTCGGATTGCCCGGCTACCACCCCAACGTTGTCTGCGATAGAGCCCACATCTCTGTCTCTCTCCACTTCGCTTTATCTCTCTAATAATGACTCATCCCTGTTCCAGGACCAACGCGACCCTCGGCACTACACTGCGACTCCTCAGCCTGCACTTTCTGCAACCGCACTACTCCAAAAGGCAGCTCAAATGGGTGCGGCAGCTTCCAACGCATCTTTGCTTCGAGGTTTAGGCTTAGCACCAGCAACTTCCTTGGCACAAAACGATATTACCTCGACACAGTGGAATAGCCGTGTAAAGACAGAGAATCACTCGTTTCCTGATGATGATGGCCTTGTGCTTGGAATTCCGTCTGCTGGTAATACAGGTTTTGCCAACTTGATGATGGGCTCGTCGTCATCGCCGTTTGGGGGACAGCCGATGACTCGTGATCTACTTGGTCTAAGCATAGGTGGTGCTGGTGGCGGGGCCAGCGTCAGGGGTGGCCTCTCTGCTTTGCTCACCTCTTTTGGTGGGAGATTTGACGTTGCAGGATCATCGACGGGAGGGAGGAATGCTCCGGCTGAAGATTAG 1497 0.5157 MAELENPSSMAVSTASGEASLSSSGGQNESEELPPPKKKRNLPGMPDPDAEVIALSPKALLATNRFVCEICSKGFQRDQNLQLHRRGHNLPWKLRQRTSKDIRKRVYVCPEPSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARTRTLTIAEGSEGNSNAKVAMASPPQPPLTPSTSVVSPALSIQSSEVSENPIRLSPPSSNVTCLPATTVANSTPSSSTTVFASIFASSSAAPSQASSILSSYSNMTSNLARSDCPATTPTLSAIEPTSLSLSTSLYLSNNDSSLFQDQRDPRHYTATPQPALSATALLQKAAQMGAAASNASLLRGLGLAPATSLAQNDITSTQWNSRVKTENHSFPDDDGLVLGIPSAGNTGFANLMMGSSSSPFGGQPMTRDLLGLSIGGAGGGASVRGGLSALLTSFGGRFDVAGSSTGGRNAPAED 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1633 498 SUPERFAMILY beta-beta-alpha zinc fingers 65 163 IPR036236 -
Acco10g1633 498 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Acco10g1633 498 SMART c2h2final6 66 88 IPR013087 -
Acco10g1633 498 SMART c2h2final6 107 137 IPR013087 -
Acco10g1633 498 SMART c2h2final6 142 162 IPR013087 -
Acco10g1633 498 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 15 461 IPR031140 -
Acco10g1633 498 Gene3D Classic Zinc Finger 120 200 - -
Acco10g1633 498 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Acco10g1633 498 Pfam Zinc finger, C2H2 type 66 88 IPR013087 -
Acco10g1633 498 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Acco10g1633 498 MobiDBLite consensus disorder prediction 1 50 - -
Acco10g1633 498 Gene3D Classic Zinc Finger 66 108 - -
Acco10g1633 498 FunFam protein indeterminate-domain 12-like 45 113 - -
Acco10g1633 498 MobiDBLite consensus disorder prediction 213 233 - -
Acco10g1633 498 MobiDBLite consensus disorder prediction 7 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1633 Acco-ChrAcco10 29812070 29814535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1633 13 477 IDZ Gene Family AT5G66730 51.479 2.96e-144 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco10g1633 zf-C2H2 0.0086 CL0361