Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1603 ATGGAATCTACCAATCTCCATCACCTTCATCAAGACCATGATCCTCGCCACTCTTCTCCTTCTTCCACCCCCTCTCTCTTTCCCCATTCTTGGACCCCCGATAATGTTTCCCCTCTGAATGCTGGTAACTTGAGTTCAAATTTCCAAGAGGCAAATCCAAGAGCAAGAGCTTTCACGCACAAGAAAGACATTGGAGGAGCTCATCATCATCATTTTGTGAACGCTTCAGGATTAGGTTATCATCATCAGTGGGCGAGTGGGGAAGAAAGCTGCGTGAGGAGTACTCAGTCAGATCAGTACGACCTTGACTTTCACTATTCAAAGATAAAGGAAGAGAACCCAGACGTTTTCCCCTGTAAATTCACTGAAATGCTAAACAGTAATACTGGTTCCAGTAATATGGAGAGCAAAGATTTCAATGCTCTTAGTGACAAGCTCTTGCTCAAAACTCTCTCTCCTGGAGACTTCTATTCAAGCTCTCCTTCTCATAATGTTGCAAATAATTTTGGTGGTGGTGGTGGTTTGGGTATGGGAGTGACACCTAGTAGAAGGACAAGCTTTAGCCAGATTTACCCAAGTATTAATATTTCAAACTTAAACAACCATTCTTCTAATTCCCCAGCTATTTCAAGCTCTTTGGATATGAACATGCAGAGCTCAGATCTATTGAACTCTGCAAGATTTAATGGCAGTTTGAGCCTACATGCCCAAGATGGTTTGGCCAGATTTGACAACGTTTCTTTTCGTCTCGATCATCATATGCATCATCAGCACCACCAAATCGAGAGGTCTTCATGCGACTCGAGTAATCCATCACACTTCACTAATGGATTAATGGGAGAAACGAAGAGGCCCAGCACAAGTTTGGTGGAGTCAAAGGCTTCATGTCAATCCCAAAATGTGACAAAAAAATCACGATTGGAATCGCGCTCATCATGCCCACCCTTTAAGGTTAGGAAAGAGAAACTTGGAGATAGGATTGCGGCTCTTCAACAGTTGGTGGCTCCTTTTGGCAAGACAGACACAGCATCCGTACTCATGGAGGCCATTGGATACATCAAATTCCTTCAAAGCCAGGTCGAGACACTAAGCGTTCCATACATGAAGTCATCACGGAACCAGAACAACCGAGCCATGCAAGGGGTTCCAGGGTTAAGTGGGGCGAGAGAAGAACCAAGATTGGATCTAAGGAGCCGAGGCCTTTGTCTCGTGCCATTGTCTTGTATGTCTTACTTAGCCGACAGTGCTGGTACTGGTGCTGGTGGTGTAGGGTGGCAACAACCTGATTTTGGTGGCGCGTCGCTATGA 1308 0.4511 MESTNLHHLHQDHDPRHSSPSSTPSLFPHSWTPDNVSPLNAGNLSSNFQEANPRARAFTHKKDIGGAHHHHFVNASGLGYHHQWASGEESCVRSTQSDQYDLDFHYSKIKEENPDVFPCKFTEMLNSNTGSSNMESKDFNALSDKLLLKTLSPGDFYSSSPSHNVANNFGGGGGLGMGVTPSRRTSFSQIYPSINISNLNNHSSNSPAISSSLDMNMQSSDLLNSARFNGSLSLHAQDGLARFDNVSFRLDHHMHHQHHQIERSSCDSSNPSHFTNGLMGETKRPSTSLVESKASCQSQNVTKKSRLESRSSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQSQVETLSVPYMKSSRNQNNRAMQGVPGLSGAREEPRLDLRSRGLCLVPLSCMSYLADSAGTGAGGVGWQQPDFGGASL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1603 435 FunFam Transcription factor bHLH123 family 317 379 - -
Acco10g1603 435 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 141 410 - -
Acco10g1603 435 CDD bHLH_AtbHLH_like 314 364 IPR045239 -
Acco10g1603 435 MobiDBLite consensus disorder prediction 1 17 - -
Acco10g1603 435 MobiDBLite consensus disorder prediction 290 309 - -
Acco10g1603 435 MobiDBLite consensus disorder prediction 1 34 - -
Acco10g1603 435 Gene3D - 317 380 IPR036638 GO:0046983
Acco10g1603 435 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 307 356 IPR011598 GO:0046983
Acco10g1603 435 MobiDBLite consensus disorder prediction 290 313 - -
Acco10g1603 435 MobiDBLite consensus disorder prediction 18 34 - -
Acco10g1603 435 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 317 369 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1603 Acco-ChrAcco10 29585319 29589692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1603 29 411 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 38.916 2.74e-67 219