LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco10g1582	ATGACTGATGGAGGATGTCGTCCGACGATGGATCTGCTACGTTCGGAGCCAATGCAGCTGGTTCAGCTCATCATTCCAACCGAATCGGCTTACCGAGCCGTCTGTTACCTTGGTGATCTCGGCCTCTTTCAATTTAAAGATCTTAATGCAGAAAAAAGCCCATTCCAGCGGACATATGCTGCTCAGATTAAAAGATGTGGGGAAATGACTCGCAAGCTTCGGTTCTTTAAGGAACAAATGGCAAAGGCTGGTGTATCACCCTCGACAAGGTCAATGAAAGATGGAGAAGTTGATCTGGACAATTTAGAGGTTAAACTTGCAGAACTTGAAGCTGAGCTAATTGAGAATAATGCGAATAATGATAAGTTGCAGCATAGTTACAGTGAGCTATTAGAATACAAACTCGTTCTGCAGAAGGTTGGTGAGTTTTTCTCTCCAGCACAAAAAAGCGCACAATCTCAACAGAGAGAACATGGAGTTCAGAGCAATTCCGAAGGGTCTATTGACAGCCCATTGCTACAGGAACAAGAGATGACAACGGAAACATCAAAGCCAATTAAACTGGGCTTTACCGCTGGCCTTGTTCCAAGAGAAAAATCAATGTCTTTTGAAAGAATTTTATTTCGTGCTACTAGGGGTAACTTTTTTCTGAAGCAAGCCCCGATTGAACATCCTGTACTTGATCCTTCGTCAGGAGAGAAGGTTGATAAAGATGTGTTTCTTATCTTTTATTCTGGAGAAAGAGCTAATAGTAAGATTTTAAAAATATGCGATGCCTTTGGAGCAAATCGTTATCCGTTCACAGACGACTTGAGTAAACAATTTCAGATTATTACAGAGGTGTCTGGAAGACTTTCCGAATTGAAGACTACCATTGATGTTGGATTGCTGCACAGGAGTGCTATATTGCAGGCAATCGGATATCACTACGAGACGTGGATCCTTCTGGTGAAGAAGGTCAAATCCATTTATCATACTTTGAATATGTTTAACATCGATGTGACAAAGAAATGTGTTGTTGCAGAAGGTTGGTGCCCTGTTTTTGCAACAAATCAGATTCAAAATGCATTGCAGCGAGCAAGAATGGACAGTCACTCACAAGTTGGGACCATATTCCAGGTTTTACGAACAAAGGAATCACCACCTACCTATTTCCGGATAAACAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAGTACCGCGAGGCAAATCCAGGCGTTTTCACAATCATCACATTTCCATTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGTTTATTTCTGGCTACTTTATATTTCATTACCAGGGAGAAGAAATTTTCTAGTCAGAAACTGGGGGACATCGTAGAAATGACTTTTGGTGGCCGCTATGTTATTATGATGATGGCACTGTTCTCAATCTACACAGGATTGATATACAATGAATTCTTCTCTGTTCCATTTGAACTATTCGGGCCATCTGCCTATGGTTGCCGTGATCCTTCATGCAGGGATGCTGGTACAACAGGCCTGATTAGAGTCCGAAGAAATTATCCATTTGGCTTGGATCCTAAATGGCACGGTACTAGGAGTGAATTGCCATTTCTTAACTCCCTAAAGATGAAGATGTCAATCCTACTGGGTGTAGCCCAAATGAACCTTGGAATTATATTGAGTTACTGTAATGCCAAATACTTTGGAAATGACATAAATATCTGGCACCAGTTCATTCCCCAGATGATATTTTTAAACAGTTTGTTCGGCTATCTTTCACTCCTCATTATCGTTAAATGGTGTACTGGATCTCAAGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGTCCAACTGATGATTTGGGTGAAAACCAGCTCTTTGAGGGCCAAAAGCTCCTTCAACTTGTGTTATTAATGTTGGCACTCATTGCTGTTCCTTGGATGCTATTCCCAAAACCCTTTCTCCTGAGGAAGCAACATCAAGAAAGACATCAAGGTCAATCTTACTTTTTGCTTCATGCCATCGATGATCCGCTTGAAGCAGAACCACACAGCCATACTGATCACCATGAGGAGTTTGATTTCAGCGAGGTTTTTGTACACCAACTTATACACACAATAGAATTTGTTCTGGGCGCAGTATCCAATACAGCGTCATATTTACGTCTATGGGCTCTCAGTCTTGCTCATTCAGAACTATCAAGTGTATTCTATGACAAAGTTCTGCTTCTGGCATGGGGGTTTAACAACATATTCGTTCTCATTATTGGCATTGCTGTCTTCATATTCGCAACTGTTGGTGTGCTCCTGATAATGGAAACTTTGAGTGCGTTCTTGCACGCTTTGAGGCTTCACTGGGTAGAGTTCCAGAACAAGTTTTACGAAGGAGATGGTTACAAGTTCAGCCCATTTTCATTTACTTTACTTAATGAGGATGATGAAGCTTAG	2457	0.4111	MTDGGCRPTMDLLRSEPMQLVQLIIPTESAYRAVCYLGDLGLFQFKDLNAEKSPFQRTYAAQIKRCGEMTRKLRFFKEQMAKAGVSPSTRSMKDGEVDLDNLEVKLAELEAELIENNANNDKLQHSYSELLEYKLVLQKVGEFFSPAQKSAQSQQREHGVQSNSEGSIDSPLLQEQEMTTETSKPIKLGFTAGLVPREKSMSFERILFRATRGNFFLKQAPIEHPVLDPSSGEKVDKDVFLIFYSGERANSKILKICDAFGANRYPFTDDLSKQFQIITEVSGRLSELKTTIDVGLLHRSAILQAIGYHYETWILLVKKVKSIYHTLNMFNIDVTKKCVVAEGWCPVFATNQIQNALQRARMDSHSQVGTIFQVLRTKESPPTYFRINKFTSAFQEIVDAYGVAKYREANPGVFTIITFPFLFAVMFGDWGHGICLFLATLYFITREKKFSSQKLGDIVEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRDAGTTGLIRVRRNYPFGLDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYCNAKYFGNDINIWHQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFEGQKLLQLVLLMLALIAVPWMLFPKPFLLRKQHQERHQGQSYFLLHAIDDPLEAEPHSHTDHHEEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNIFVLIIGIAVFIFATVGVLLIMETLSAFLHALRLHWVEFQNKFYEGDGYKFSPFSFTLLNEDDEA	818

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco10g1582	818	PANTHER	VACUOLAR PROTON ATPASES	12	815	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Acco10g1582	818	Pfam	V-type ATPase 116kDa subunit family	37	809	IPR002490	GO:0033179\|GO:0046961\|GO:1902600
	Acco10g1582	818	Coils	Coil	92	126	-	-
	Acco10g1582	818	PIRSF	ATP6V0A1	8	818	IPR026028	GO:0000220\|GO:0046961
	Acco10g1582	818	MobiDBLite	consensus disorder prediction	148	171	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco10g1582	Acco-ChrAcco10	29389824	29397002	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco10g1582	10	817	Primary Pumps ATPases(2)	AT4G39080	74.784	0.0	1255