Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1577 ATGGCATCAACGGCTAGTTTTTTGTGTTTCTTCGTCGCGTTGGCCTCCTTCTTGTGTTGCGTGGAGTCGTTGTCGGAAATTGACGCCTTAACGGCTTTCAGGCTTAATCTCCACGACCCACTCGGCTCCTTGGACGGCTGGGATCCCTCCACACCTTCCGCTCCTTGTGATTGGCCTGGCATTTTCTGTTACAACAACCGAGTTCGCGAGCTTCGCTTGCCTCGCCTTCAACTCGCCGGTCGGCTCTCGGATTCCCTCTCCAGCTTGCTTCAACTTCGCAAGCTGAGCCTTCATTCTAACAACTTCAATGGCTCCATTCCTCCTTCTCTCTCTCAATGCCTGCTTCTTCGTTCTGTTTATCTTCAGAATAACTCTTTTTCTGGTAAACTCCCGGCGGCTCTTCTCAACCTCACCAACCTTCAAATCTTCAACGTTGCTCACAACTTTTTTTCTGGCCGAATCCCCGGAGATTTATCGAACTCTCTCCGGTTCCTTGATATATCGTCGAATGCATTTACCGGTGACATTCCGGCTAGTTTTTCGTCAAAATCTCAGCTGAGATTCATCAACTTGTCCTACAATCGGTTCTCTGGAAGAATACCGGCCACTATTGGACTTCTGGGGCAGCTTGAGTATCTTTGGCTGGACTCCAACCAGTTCTATGGGAGTCTGCCTTCGGCTCTAGTTAACTGCTCTTCTCTTGTGTATCTAAGCGCCGTAAACAATGCGCTTTCCGGTTTGGTTCCGGCGACCATGGGGACGATGCCGAGGCTTCAAGTGCTGTCGTTGTCGTCGAATCAGCTGTCGGGACTGGTCCCCACTTCTCTGTTTTGCAATGTCCACTTGGCCAATTCTTCTTCGCTGAGAATCGTTCAATTAGGCTTTAATAAACTCACGGGCATTTCCGAGCCGCCAAATGCAAGGTGTGTTAATGTTTTGGAGATTTTAGAGCTTAAGGAGAATCGTATTCGCACCACATTTCCCTCCTGGTTGACTCATGCGACGTCGTTAAGAGCTGTTGATTTTTCCGGGAACTACTTTTCTGGTATTTTGCCTGCGGAGATTGGGAATTTATTGAGGCTAGAGGAGCTGAGGGTGGCAAATAATTCATTATCTGGTGATGTTCCTCGTGAAATTGTGAAATGTACTTTGTTACAGGTTCTTGATCTTCAAGGAAACCGATTTTCCGGCCTCATTCCTTCATTTCTTGGCCAACTGAGGAACCTCAAAATGCTCTCTCTTGGCCATAACCTGTATACTGGTCCTATACCCTCGAGTTTGGGTACACTTTCTGAGCTCGAGTCGTTGAATTTGAGCAATAATAAACTTACCGGGTTTATACCCCCAGAATTAATGCGATTGGGTAACATGAGTGCTTTGAATCTCAGTAATAACAAATTTTCAGGCCAACTTTCGTCTGCCATTGGGGACTTAACAGCTTTACAGGTTCTGAATTTGAGTCAATGTGGGTTTTCAGGACAGATTCCTGCTAGTGTTGGCGGTTTAATGAAACTGACGGTGCTGGATTTAAGTAGACAAAATCTTTCAGGTGACTTGCCAATCGAGCTTTTTGGATTACCTAGCCTGCAGGTTGTTGCTCTTCAAGAGAACCATTTATCTGGCGCTGTTCCAGAGGGTTTCAGCAGTGTAGTTACTCTACAATATCTTAATATCAGCTCCAACGTCTTTGCTGGTGAAATTCCAGCTACTTATGGATTTCTTCGGTCGTTAATTGTTCTTTCTGCGTCTCAGAATCATATTTCTGGTAGAATACCATCAGAGATTGGTAACTGTTCTCAGCTTGAAGTGCTCGAGCTTCGTTCAAATCGTTTGCATGCTGACATACCTGGCTATATCGACCGTCTTACTCGTTTAAGGGTCCTTGATTTGGGATACAACAAGTTAACAGGAGATATTCCAGAAGAAGTATCGGAATGTTCTGCTTTGACTTCACTCCTATTGGATGCTAATAAACTAACAGGTCAAATGCCAGAATCCCTGTCAAGTTTATCAAACCTGACTGCCTTAGATCTCTCCTCAAATCAGCTGAGCGGAGACATTCCGGCCACCCTGTCACTTCTATCTGGTTTGAAGTATTTAAATGTCTCTAGAAATAATCTTGAGGGTGAGATTCCAGAAATGCTGGGCTCCCGGTTCAATGATCCTTCTATATATGCAATGAATAACGGGTTATGCGGAAAGCCACTGCATAGAGAATGTGCTAATGTAAGAAGTCGAAAGAGGAAGAGACTAATAATATTTATAGGCGTGGCTCTTGGTGCACTATGCCTTTTGGGACTATGCTGCTGTGGCTACATTTATAGCCTCTTACGTTGGCGCAAGAAGCTAAGAGAAGGAGTAACAGGGGAGAAGAAGAAGAAGAGCCCTGCTCGTTCAAGTTCAGGAGCAGACAGAGGTCGAGGAAGTGGGGAAAATGGAGGGCCAAAACTAGTAATGTTCAACAACAAGATCACTTATGCTGAGACACTGGAAGCAACTAGACAATTTGATGAAGAGAATGTGTTGAGCAGAGGAAGATACGGTCTTGTGTTCAAAGCCTCGTACGCAGATGGAATGATGCTCTCAATCCGTCGTCTTCCTGATGGATCCATAGAGGAAGGAAGCTTCCGCAAAGAAGCAGAATCATTAGGAAAAGTGAAGCACCGCAATTTAACAGTATTGCGGGGCTATTATGCAGGGCCACCTGATGTGAGGCTTCTTGTTTTTGACTACATGCCAAATGGAAACCTTGGAACTCTTCTTCAAGAAGCATCTCAGCAAGACGGCCATGTACTGAATTGGCCTATGCGTCATCTCATCGCACTAGGCATTGCTCGTGGGCTAGCCTTCCTACATTCAGTCTCAATAGTTCATGGCGATGTGAAGCCTCAAAATGTTCTGTTTGATGCTGATTTTGAAGCCCATTTATCAGAATTTGGCTTAGACAGAATAACAATCGCAACCCCAGCAGAAGCATCGTCATCATCCACTCCCGTAGGATCATTGGGGTACGTGTCGCCAGAAGCAGCGTTAACTGGGCAAGCGACCAAAGAAGCCGACGTGTACAGCTTTGGGATTGTATTGCTGGAGATACTGACGGGAAGAAAACCGGTGATGTTCACGCAAGATGAAGACATAGTGAAATGGGTTAAAAGGCAATTGCAAAGAGGTCAGATATCGGAATTGCTTGAGCCTGGATTGCTTGAGTTAGACCCAGAGTCATCGGAATGGGAAGAGTTCTTGTTGGGGATCAAAGTTGCTCTTCTATGCACAGCACCGGATCCTCTTGATCGGCCGTCAATGACTGACATTGTTTTCATGCTTGAAGGTTGCCGGGTGGGACCGGAGATTCCATCGTCGGCCGATCCCACCACGGTAGCTTCCCCTACTTGA 3393 0.4598 MASTASFLCFFVALASFLCCVESLSEIDALTAFRLNLHDPLGSLDGWDPSTPSAPCDWPGIFCYNNRVRELRLPRLQLAGRLSDSLSSLLQLRKLSLHSNNFNGSIPPSLSQCLLLRSVYLQNNSFSGKLPAALLNLTNLQIFNVAHNFFSGRIPGDLSNSLRFLDISSNAFTGDIPASFSSKSQLRFINLSYNRFSGRIPATIGLLGQLEYLWLDSNQFYGSLPSALVNCSSLVYLSAVNNALSGLVPATMGTMPRLQVLSLSSNQLSGLVPTSLFCNVHLANSSSLRIVQLGFNKLTGISEPPNARCVNVLEILELKENRIRTTFPSWLTHATSLRAVDFSGNYFSGILPAEIGNLLRLEELRVANNSLSGDVPREIVKCTLLQVLDLQGNRFSGLIPSFLGQLRNLKMLSLGHNLYTGPIPSSLGTLSELESLNLSNNKLTGFIPPELMRLGNMSALNLSNNKFSGQLSSAIGDLTALQVLNLSQCGFSGQIPASVGGLMKLTVLDLSRQNLSGDLPIELFGLPSLQVVALQENHLSGAVPEGFSSVVTLQYLNISSNVFAGEIPATYGFLRSLIVLSASQNHISGRIPSEIGNCSQLEVLELRSNRLHADIPGYIDRLTRLRVLDLGYNKLTGDIPEEVSECSALTSLLLDANKLTGQMPESLSSLSNLTALDLSSNQLSGDIPATLSLLSGLKYLNVSRNNLEGEIPEMLGSRFNDPSIYAMNNGLCGKPLHRECANVRSRKRKRLIIFIGVALGALCLLGLCCCGYIYSLLRWRKKLREGVTGEKKKKSPARSSSGADRGRGSGENGGPKLVMFNNKITYAETLEATRQFDEENVLSRGRYGLVFKASYADGMMLSIRRLPDGSIEEGSFRKEAESLGKVKHRNLTVLRGYYAGPPDVRLLVFDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVSIVHGDVKPQNVLFDADFEAHLSEFGLDRITIATPAEASSSSTPVGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKRQLQRGQISELLEPGLLELDPESSEWEEFLLGIKVALLCTAPDPLDRPSMTDIVFMLEGCRVGPEIPSSADPTTVASPT 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1577 1130 PRINTS Leucine-rich repeat signature 433 446 - -
Acco10g1577 1130 PRINTS Leucine-rich repeat signature 670 683 - -
Acco10g1577 1130 Gene3D Ribonuclease Inhibitor 281 381 IPR032675 -
Acco10g1577 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 450 744 - -
Acco10g1577 1130 SMART LRR_typ_2 137 161 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 358 382 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 670 693 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 207 231 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 694 718 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 478 502 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 255 278 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 430 454 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 89 113 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 526 549 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 574 598 IPR003591 -
Acco10g1577 1130 SMART LRR_typ_2 622 646 IPR003591 -
Acco10g1577 1130 ProSiteProfiles Leucine-rich repeat profile. 432 453 IPR001611 GO:0005515
Acco10g1577 1130 SUPERFAMILY L domain-like 22 302 - -
Acco10g1577 1130 Gene3D Ribonuclease Inhibitor 382 455 IPR032675 -
Acco10g1577 1130 SMART serkin_6 836 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1577 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Acco10g1577 1130 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 378 1110 - -
Acco10g1577 1130 ProSiteProfiles Leucine-rich repeat profile. 672 694 IPR001611 GO:0005515
Acco10g1577 1130 ProSiteProfiles Protein kinase domain profile. 836 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1577 1130 Gene3D Ribonuclease Inhibitor 173 280 IPR032675 -
Acco10g1577 1130 Pfam Protein kinase domain 838 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1577 1130 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 912 1116 - -
Acco10g1577 1130 FunFam Leucine-rich repeat receptor protein kinase EMS1 200 302 - -
Acco10g1577 1130 SUPERFAMILY L domain-like 501 736 - -
Acco10g1577 1130 Gene3D Transferase(Phosphotransferase) domain 1 912 1116 - -
Acco10g1577 1130 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Acco10g1577 1130 SUPERFAMILY L domain-like 283 531 - -
Acco10g1577 1130 Gene3D Ribonuclease Inhibitor 456 743 IPR032675 -
Acco10g1577 1130 SUPERFAMILY Protein kinase-like (PK-like) 815 1118 IPR011009 -
Acco10g1577 1130 Pfam Leucine Rich repeat 671 686 IPR001611 GO:0005515
Acco10g1577 1130 FunFam Putative LRR receptor-like serine/threonine-protein kinase 799 911 - -
Acco10g1577 1130 MobiDBLite consensus disorder prediction 788 816 - -
Acco10g1577 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 182 - -
Acco10g1577 1130 Pfam Leucine rich repeat 504 561 IPR001611 GO:0005515
Acco10g1577 1130 Pfam Leucine rich repeat 600 659 IPR001611 GO:0005515
Acco10g1577 1130 Pfam Leucine rich repeat 385 443 IPR001611 GO:0005515
Acco10g1577 1130 Gene3D Phosphorylase Kinase; domain 1 812 911 - -
Acco10g1577 1130 FunFam Piriformospora indica-insensitive protein 2 351 448 - -
Acco10g1577 1130 SMART LRR_bac_2 670 690 - -
Acco10g1577 1130 SMART LRR_bac_2 285 304 - -
Acco10g1577 1130 SMART LRR_bac_2 430 451 - -
Acco10g1577 1130 SMART LRR_bac_2 694 714 - -
Acco10g1577 1130 Gene3D Ribonuclease Inhibitor 24 172 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1577 Acco-ChrAcco10 29334387 29337779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1577 1 1129 Receptor kinase-like Gene Family AT1G75640 63.908 0.0 1375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Acco10g1577 Pkinase 4.9e-33 CL0016