Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1562 ATGGCAAGCTTGAGGAAGGTTGGAACTTCTTCTTCAGCCAAATTAGAGGAGCCATCCACTAAATTGAGTCTAGGGATGGTAGGTTCTTCGTTTCAATCAAAGATGGTGACTGTTGTTGATGATCATCGTGAGAGGAAGAAAATGCCCATGAATAATAATAATCCTGTCCCCCATATTGACTTGACTCTCGACGACGACGACGATCTCCCGGTGAAGAAGAAAGTAATCGAAGTTGGTGGCGGCTCAAGTTCTCGTGGTGGTAGTGAAGGCCGCCGAGCAATTCCTTTGGCTCCAAACTCTAGGCGATCAGTTCAAGAAGTAATGGAGCGAAGGAGGATCAACCGACTTTCTGCTAAGAGATCGAGAGAGAGGAAGAATGAGTACGTGGCTGAGATGGAGAGACAAGCAAAATATTTGGAGCATAAGATAACCATGCTTCACCCACGAGTTATGGCTTTCCAGCATCAGCGTCGCTTATTGCTGATTGAGCAGAACGAGATGAAATTTCGAATGTCTTTGGTTGAACATGACAGGCTTCTTAAAGAAAGGCAAACGGAGAAGATGAAAGAAGAAATAATGAGGCTTTTAGAAATTAAGAAGCGTCAAGAGAAAATTCGAGCTGAAGAAATGAAAACTTGGGGTGCTGATATTTCGTTAATGTGCCCCAACCCAAACCCTGCAGGTCCCTCCAAACCACTGGTTATTGCCTCAACTTCATCACCCGTTAAAGAAGCTAAAATTGTTGAACCATCAGAGATCGAGGCTGATGATACTGACAACAATCTCATAAACAAAGGCAAAGGGAAGGCGAAGGCTTATTAA 822 0.4392 MASLRKVGTSSSAKLEEPSTKLSLGMVGSSFQSKMVTVVDDHRERKKMPMNNNNPVPHIDLTLDDDDDLPVKKKVIEVGGGSSSRGGSEGRRAIPLAPNSRRSVQEVMERRRINRLSAKRSRERKNEYVAEMERQAKYLEHKITMLHPRVMAFQHQRRLLLIEQNEMKFRMSLVEHDRLLKERQTEKMKEEIMRLLEIKKRQEKIRAEEMKTWGADISLMCPNPNPAGPSKPLVIASTSSPVKEAKIVEPSEIEADDTDNNLINKGKGKAKAY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1562 273 MobiDBLite consensus disorder prediction 1 20 - -
Acco10g1562 273 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 104 160 IPR004827 GO:0003700|GO:0006355
Acco10g1562 273 MobiDBLite consensus disorder prediction 250 264 - -
Acco10g1562 273 Gene3D - 104 160 - -
Acco10g1562 273 SUPERFAMILY Leucine zipper domain 109 157 IPR046347 GO:0003700|GO:0006355
Acco10g1562 273 MobiDBLite consensus disorder prediction 250 273 - -
Acco10g1562 273 Pfam Basic region leucine zipper 109 150 IPR004827 GO:0003700|GO:0006355
Acco10g1562 273 PANTHER BASIC LEUCINE ZIPPER 34 97 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1562 Acco-ChrAcco10 29247317 29249952 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1562 86 182 bZIP Transcription Factor Family AT3G58120 34.343 1.58e-11 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco10g1562 bZIP_2 1.3e-07 CL0018