Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1545 ATGGGATACAATTCAGTGCTCCGAAGCCCAAAGAAAGAGGAGCAGCAAGTCCCCGACGCTACACCTTTTTCCAACGATGATTTCAATATCTTGGATGAACTCGGCGACGGCGTTTTAGGCTCTGAACTCGACCACTCAGAATTACAACATCATTGTTATGGTGTTCACCTTAATTGGGACTTCATGGGATTGGAAGGTTTCTCAACTGTTGATGCAGAGGAAGCAGAAGTAGCAAACGACAATGAAGGCGAAGAACAGGAGGAGGAGAGAAGCCAATGCCGCCTTGTGGAAAAGGACAAGATTATAAAGACAGAAAATAATGGTGGAGGTCTCTGGGAAGAAGACGATGATGATGATGAGAAGACGGCGTCTTTGAAATTGAACTTGAACTATCAAGAGGTTTTGGACGCATGGTCTGACCGTGGCTCTCTCTGGGCCCACGATTCTTCTCTTTCAATGCCTTCCAACGCTAATGATGCATTCTTCTATATGGGAGAAGTTCCAATACTGCAGGAGGAAGACAGAAGCAGAAGGAATGCGAGTGTTAGAAGGTACAAAGAGAAGCGTCAGAGCAGACTCTTCTCCAAGAAGATAAGATACCAAGTCCGAAAACTCAATGCTGATAAAAGACCTCGACTCAAGGGTCGTTTTGTGAAGGAGAGACCTTAA 669 0.4529 MGYNSVLRSPKKEEQQVPDATPFSNDDFNILDELGDGVLGSELDHSELQHHCYGVHLNWDFMGLEGFSTVDAEEAEVANDNEGEEQEEERSQCRLVEKDKIIKTENNGGGLWEEDDDDDEKTASLKLNLNYQEVLDAWSDRGSLWAHDSSLSMPSNANDAFFYMGEVPILQEEDRSRRNASVRRYKEKRQSRLFSKKIRYQVRKLNADKRPRLKGRFVKERP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1545 222 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 14 220 - -
Acco10g1545 222 Pfam CCT motif 178 220 IPR010402 GO:0005515
Acco10g1545 222 MobiDBLite consensus disorder prediction 1 25 - -
Acco10g1545 222 ProSiteProfiles CCT domain profile. 178 220 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1545 Acco-ChrAcco10 29079966 29080887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1545 113 219 C2C2-CO-like Transcription Factor Family AT1G73870 44.262 9.77e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco10g1545 CCT 4.5e-18 CL0281