Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1507 ATGGCTTCAACTGCTCTTCAATGGCTAAGTCTTGTAGGCATCATTTGGCTCCAAGCCATAAACGGAACAAACACTAATTTCCCTGCTTACTCATCTCAACTGAAGCAGCTTCTTTCAATTTCACAAGTTCAGCTCAACAACCTTGCTTTTGCCTCTGATGCAGGCAAACTCCTTGGCTGGTTCTCTGGCATGGCTTCTGTTCACCTTCCTCTCTGGCTTGTTCTTGTGATCGGTTCAAGTCTTGGGTTGGTTGGTTATGGAGTCCAATATCTCTTCATCACAAACCAAATCTCTTCTCTGTCCTACTGGCATGTCTTCTTACTAACTGTTCTTGCTGGAAACAGCATTTGTTGGATTAACACTGTCTGTTATGTCATCGCTATCAGGAACTTCCCATCTGATCACCAGGTCGCCGTGGGGTTAACAACTAGTTATCAAGGGTTAAGTGCAAAGATCTATACTAATATTGTCCAAGTTCTTTCTTCCCGCAAAAAAGCTAGATACTTTCTTTTCTTGAACTCTGTCTTACCTCTATTAGTGAGCCTCATGGCAACTCCTTTAACTAGGGAAATTGAAGTCACAAGGCGAAAACGAATGCGTGTTGGATTTGTTGTAATGTTTGTTATTACAATTTCCACTGGTGTATATGCTGTTCTAAGCAGCTTGCAATTTTTGTCTCGCAATTTATCTCCATTGGGTAATCTGATTGGTATTCTAGCGTCCCTTATCCTCCCTCTACTGCTTCCAGTCTCAGAGAAGATCAACGAATTGGTGAGATCATGGCAAGCCAATCGAGAAAGACTAAGAGTTTATCATTTTACTGTGGAGGAAAATAACAGTCCTAATCAAGAGAGGATAGAGAGTACAGAGCCAAAAGATGAAGGGGAGGAACAAGAAGAAGATAGCAACAGAGAGGCTCAAGTTCAAGAAGTTGTTGTCAGAGAAGAAATTGGAGTGAAGTTAATGCTGAGAAGAATAGATTTCTGGTTATATTTTTTAATATATTTATTCGGTGCAACACTTGGTTTAGTCTTTATGAACAACCTGGGACAAATTGCAGAGTCCAGAGGCGACTCCAACACCTCATCTCTGGTATCATTGTCTTCATCCTTTGTGTTCTTTGGCCGTCTCATGCCATCTCTCATGGACTACTTCTGCAGGAGCAAGGTAAGGATTTCAAGGCCAGCTAGTATGGCGATATTAATGGCGCCAACAGCAGGATCATTCTTGTTGCTTCTAAACAGAACAGAGCTCGCTCTGTACACGAGCACTGCCATAATAGGAGTGTGCACTGGAGGTATCACTTCAATTTCTGTGTCCACAACCACTGAACTGTTTGGGACTAAGAACTTCTCAGTGAACCACAACATTGTTGTGGCCAACATTCCCATTGGTTCTTTTGTGTTTGGTTACTTGGCTGCTCTGATTTATCGCAAGGAAGAAGATGAAGATGGGAAATGCATTGGCATGGAGTGTTATAGAACTACTTTCATTATCTGGGCTTCGCTTTGCTTCTTTGGGACCTTGCTGGCCCTGATTCTGCATGCTAGAACTCGCAAGTTTTATTCGCAGAGAGACAACAAATAG 1587 0.4228 MASTALQWLSLVGIIWLQAINGTNTNFPAYSSQLKQLLSISQVQLNNLAFASDAGKLLGWFSGMASVHLPLWLVLVIGSSLGLVGYGVQYLFITNQISSLSYWHVFLLTVLAGNSICWINTVCYVIAIRNFPSDHQVAVGLTTSYQGLSAKIYTNIVQVLSSRKKARYFLFLNSVLPLLVSLMATPLTREIEVTRRKRMRVGFVVMFVITISTGVYAVLSSLQFLSRNLSPLGNLIGILASLILPLLLPVSEKINELVRSWQANRERLRVYHFTVEENNSPNQERIESTEPKDEGEEQEEDSNREAQVQEVVVREEIGVKLMLRRIDFWLYFLIYLFGATLGLVFMNNLGQIAESRGDSNTSSLVSLSSSFVFFGRLMPSLMDYFCRSKVRISRPASMAILMAPTAGSFLLLLNRTELALYTSTAIIGVCTGGITSISVSTTTELFGTKNFSVNHNIVVANIPIGSFVFGYLAALIYRKEEDEDGKCIGMECYRTTFIIWASLCFFGTLLALILHARTRKFYSQRDNK 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1507 528 Gene3D MFS general substrate transporter like domains 273 520 IPR036259 -
Acco10g1507 528 SUPERFAMILY MFS general substrate transporter 7 520 IPR036259 -
Acco10g1507 528 Pfam Nodulin-like 7 249 IPR010658 -
Acco10g1507 528 CDD MFS_Mch1p_like 6 508 - -
Acco10g1507 528 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 523 - -
Acco10g1507 528 MobiDBLite consensus disorder prediction 279 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1507 Acco-ChrAcco10 28827501 28829309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1507 1 525 Nodulin-like Gene Family AT2G30300 48.889 6.08e-157 455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1507 10 28827501 28829309 Acco05g0858 05 15931030 15933769 CCT
Acco10g1507 10 28827501 28829309 Acco10g1507 10 28827501 28829309 ECH