Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1499 ATGCAACCCCATAACCCCCAATCAAGACTGGATAGGAGAAGAAAAACAGGGAGTGCAACAGAGCAAGAAATGCCATTTTGTTCCAGTTCAATCATGTTCTTCATTCTTGTTTTTCACTTTCATCTTCTTGCTGTTCCATTCATAGGGTTAGTTTCACTTGCAGCAATCTTAGCCCCAATCTTGTTATGTCTCCATCTCTGGCTCCTTCTTGCTGAGTCTTTCTGGGATCACGAGCTCTGTGATAAAGGTTGTTCAATTCGAAAGCGACTCCATGAGGTATCAGCTAACAAGGAGCTGGCTAAGATGGTTGTAAACTCCAGCGTACAGGTTTACCAGAGTTTCATGCAACAAATTCGAACAGAACTTGTTAGGATGACGACGTCAGATGCGGGTTTTGAAGTCTCTACTCTCTACGAAGTCAGTGGTTTTTTTGGCCAGGCTAGTCAGTGGTTGAATAATAGAACGAAGACCAAAAAGAGAAATGGTGATATAGAAGCTCGACCCCTCTTTGATATCTCAAAAATTGCCCTAAGCGAGCATCCCATTCCTCTGGTAGATGCGATCACCTCTGGGTTTGTTCAGGAAACCATCTTGCTGTCATCCATAAACTCTTCATCCGTTTCAATTTTCTCCTCTTCAGGTCCAGGGGTTCCTAAAAATAACATCTTTTTCATTGCCTTTCGGTCGGGTGTTATGGAGATATCCTTGTTAAATGTGCTTGTCAATGGCATATCCTCATTTTTGCACCTATCTTTTTCTGGCAATGGGAACTCAGAATTTGTTTCTAAGTATTACCAAAAGGTGGGGGAGACACTTAAGTTGCTCAAGCCTATAGCTGACGCTTTGGTTAATTTTGAATTAGCTTCTGATGAAGTGCTTAACAAGGCATTTGAAGAAGTGGGTCGGGCTGTTGATGAGTTGAGGGAGCTTTTTGGGAATTGGCACCCTTTATCTAGCAAAGTTTACCTTGTTATGCGAGTTGAATCCTTGTTATCTAGGATTCAGACTTCGGCACTCAATATTTTTCAGCAGCTGAAGATTTCTCATCTAAGTCTCCCAGACGAACTGAATACTGTACAAGTTGAGCATTGTGCTGAGAAACTTAAGCTTTTGGGACATGAGGAGGAAATCTCGTCAGTCATTAAAGAAGCTATTAGCGAACAAATGGAAGGTGCAGGACCTAGTTCAGAGGTCCTAGCAAACATTGCTGAGAGCCTGAGCCTGAGGTCTAACCAAGAGATTCTGATTGAGGCTGTAGCCCTTGAAAAGTTAAAGGAGATTGCTGAACAAGCTGAAAAAACTGCTGAAGCTGAGTATATTGATCAAATGATTACTCTTGTAACTCGCATGCATGAGCGTCTTGTTGCGCTTAAGCAAGCCCAGAGCAGCAGCCCAGTTGCAGTACCTCCTGATTTTTGCTGTCCTCTTTCTTTGCAGTTAATGATGGATCCGGTAATTGTGGCTTCAGGGCAAACGTATGAGCGGGCTTTCATCAAGAACTGGATTGATTTGGGACTTACCGTCTGTCCAAAGACCCGTCAGACCTTGGCTCACACCAACCTAATACCTAACTACACTGTCAAGGCGTTAATTGCAAACTGGTGTGAATCAAACAATGTGAAGCCAACTGATCCCATAGTGTCCACAAACTTAAATCAAGCATCTTTTCTTCATGGGTACATGGAATCTGGTGCAACAAGGGAATCACCTGTTTTAGCTCATTCTAGGACCAACCAACCATCCTCTCCAGAGGCAGTTCGCTCCCATTCTTTCAGTTCACCGAGTAAGAGCTTAACTTCTGGAGGAATCCACAGAGAGGGAACATCACCATTTCATCCTCGTTCAACTTCAGAAGGCTCCATAAGCGTCATGGCTAATGGACAGTGTTTGGATTTTGCAAGAACATCAGCTGCAGGTTCTGATGATAGGTCTGCTAGCTCAGATGAAAGGAGTGAGGATTCAGTTGTCCAATCGTCAATGTCTCAACCTATTACTGAATCTTCCAATGCCCATAGCTCTGAACAATCCCAAGGCCATGTTAGAGCAGCTTCTGATTCCAGTGCACTTTCCAGTGTTCAAGGAATACCTGGCGATGGTAACAGTACTCCTCAGCTGTCAGCGACTTCTGTCAATGGTAAGGATGGTTCTGTGGGGGTAAATTCTGGGATAGATGCTAATGGTGCTCCCCAGAGAGAACCTGAGATCTTACCCCGTGCGGAGACAAGGCCTCGAAACCAAAGTATGTGGCGGCGGCCATCAGAAAGATTTTTTCCTAGGGTGGTGCCCTCTGCTGGCGAAACAAGAGCTGATCTCTCTGGTATTGAGGTCCAGGTTAAGAGCTTGGTTGAGGACTTGAAGAGTGGTTCTGTTGATACTCAAAGGGAGGCAACATCAAGGCTCCGCCTTCTTGCTAAGCACAATATGGATAATCGACTTGTGATTGCAAACTGTGGAGCCATTGAATTGTTGGTTGAGTTGCTTAAATCAACTGATACGACAATCCAGGAAAATTCTGTGACAGCACTTCTGAACTTATCGATCAATGATAACAACAAAAGTGCAATTGCAAATGCTGGGGCGATTGAGCCTCTAATCCATGTGCTTGAGACAGGAAGCCCGGAAGCGAAGGAGAATTCAGCTGCCACTCTCTTCAGCTTATCAGTGATTGAAGAAAACAAGATCAGGATAGGGAGGTCTGGGGCAGTAGGGCCTCTGGTTGATTTATTAGGTAACGGAACTCCTAGAGGAAAGAAAGATGCTGCCACTGCTTTATTTAACTTGTCAATTTATCATGAAAACAAGGGCCGCATTGTGCAAGCTGGATCCGTGAAGCACCTTGTGGAATTAATGGATCCAGCTGCCGGTATGGTTGACAAGGCGGTAGCTGTTTTAGCAAACCTGGCCACAATTCATGAAGGAAGAATCGCCATTGGCCAGGAAGGCGGGATCCCTGTTTTAGTTGAGGTTGTCGAGTTGGGTTCTGCAAGAGGAAAGGAGAACGCAGCCGCGGCTCTACTACACCTTTGCTCTAACGAAACTCGATATTTGAGCACCGTGCTTCAAGAAGGAGCTGTCCCACCATTAGTAGCCTTGTCACAGTCAGGCACCCCAAGAGCTAAAGAAAAGGCGCAGGCTCTCCTCAACCAAATTAGAAATCAAAGAAATACTGGGAGAGGCTGA 3180 0.4494 MQPHNPQSRLDRRRKTGSATEQEMPFCSSSIMFFILVFHFHLLAVPFIGLVSLAAILAPILLCLHLWLLLAESFWDHELCDKGCSIRKRLHEVSANKELAKMVVNSSVQVYQSFMQQIRTELVRMTTSDAGFEVSTLYEVSGFFGQASQWLNNRTKTKKRNGDIEARPLFDISKIALSEHPIPLVDAITSGFVQETILLSSINSSSVSIFSSSGPGVPKNNIFFIAFRSGVMEISLLNVLVNGISSFLHLSFSGNGNSEFVSKYYQKVGETLKLLKPIADALVNFELASDEVLNKAFEEVGRAVDELRELFGNWHPLSSKVYLVMRVESLLSRIQTSALNIFQQLKISHLSLPDELNTVQVEHCAEKLKLLGHEEEISSVIKEAISEQMEGAGPSSEVLANIAESLSLRSNQEILIEAVALEKLKEIAEQAEKTAEAEYIDQMITLVTRMHERLVALKQAQSSSPVAVPPDFCCPLSLQLMMDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLAHTNLIPNYTVKALIANWCESNNVKPTDPIVSTNLNQASFLHGYMESGATRESPVLAHSRTNQPSSPEAVRSHSFSSPSKSLTSGGIHREGTSPFHPRSTSEGSISVMANGQCLDFARTSAAGSDDRSASSDERSEDSVVQSSMSQPITESSNAHSSEQSQGHVRAASDSSALSSVQGIPGDGNSTPQLSATSVNGKDGSVGVNSGIDANGAPQREPEILPRAETRPRNQSMWRRPSERFFPRVVPSAGETRADLSGIEVQVKSLVEDLKSGSVDTQREATSRLRLLAKHNMDNRLVIANCGAIELLVELLKSTDTTIQENSVTALLNLSINDNNKSAIANAGAIEPLIHVLETGSPEAKENSAATLFSLSVIEENKIRIGRSGAVGPLVDLLGNGTPRGKKDAATALFNLSIYHENKGRIVQAGSVKHLVELMDPAAGMVDKAVAVLANLATIHEGRIAIGQEGGIPVLVEVVELGSARGKENAAAALLHLCSNETRYLSTVLQEGAVPPLVALSQSGTPRAKEKAQALLNQIRNQRNTGRG 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1499 1059 FunFam RING-type E3 ubiquitin transferase 467 542 - -
Acco10g1499 1059 SUPERFAMILY RING/U-box 458 544 - -
Acco10g1499 1059 FunFam RING-type E3 ubiquitin transferase 762 1056 - -
Acco10g1499 1059 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 941 982 IPR000225 GO:0005515
Acco10g1499 1059 MobiDBLite consensus disorder prediction 651 716 - -
Acco10g1499 1059 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 900 942 IPR000225 GO:0005515
Acco10g1499 1059 MobiDBLite consensus disorder prediction 636 751 - -
Acco10g1499 1059 CDD RING-Ubox_PUB 469 521 IPR045210 -
Acco10g1499 1059 Pfam U-box domain 468 538 IPR003613 GO:0004842|GO:0016567
Acco10g1499 1059 Gene3D - 766 1056 IPR011989 -
Acco10g1499 1059 SUPERFAMILY ARM repeat 778 1050 IPR016024 -
Acco10g1499 1059 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 449 545 IPR013083 -
Acco10g1499 1059 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 818 860 IPR000225 GO:0005515
Acco10g1499 1059 PANTHER U BOX DOMAIN-CONTAINING 262 1049 - -
Acco10g1499 1059 MobiDBLite consensus disorder prediction 1 21 - -
Acco10g1499 1059 MobiDBLite consensus disorder prediction 572 619 - -
Acco10g1499 1059 ProSiteProfiles U-box domain profile. 467 541 IPR003613 GO:0004842|GO:0016567
Acco10g1499 1059 MobiDBLite consensus disorder prediction 735 749 - -
Acco10g1499 1059 Coils Coil 418 441 - -
Acco10g1499 1059 Pfam Armadillo/beta-catenin-like repeat 891 928 IPR000225 GO:0005515
Acco10g1499 1059 Pfam Armadillo/beta-catenin-like repeat 809 846 IPR000225 GO:0005515
Acco10g1499 1059 Pfam Armadillo/beta-catenin-like repeat 848 887 IPR000225 GO:0005515
Acco10g1499 1059 SMART arm_5 848 888 IPR000225 GO:0005515
Acco10g1499 1059 SMART arm_5 889 929 IPR000225 GO:0005515
Acco10g1499 1059 SMART arm_5 1011 1052 IPR000225 GO:0005515
Acco10g1499 1059 SMART arm_5 970 1010 IPR000225 GO:0005515
Acco10g1499 1059 SMART arm_5 930 969 IPR000225 GO:0005515
Acco10g1499 1059 SMART arm_5 807 847 IPR000225 GO:0005515
Acco10g1499 1059 SMART Ubox_2 471 534 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1499 Acco-ChrAcco10 28757528 28766989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1499 427 1059 U-box Gene Family AT2G23140 60.736 0.0 702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1499 10 28757528 28766989 Acco05g0854 05 15697608 15700871 CCT