Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1497 ATGCAGCCTCATTTTTTATTCCTTCTATGCACTTCTTTCCCTATTCTGAGAAGTATTACTTCCCCACTTGTTCGTGTTTGTGCCTCAAGGAAGTCCTTCCTCCTTAAAGCTCCACCACACAGATCAAGACAATCAAGAGGCATGCTTGGGTATCCAGAAACAGAAAGAGCAGAAGAGATAGCGAAGAACACAGGAGAGACGGTATCATCAGAAGCGTCTAGCCAAATGGGAAGGAGAAATTTCTATGGACCAGCAGCTTCAGGGACAACCTTAAACTCTGTAATTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGATGTGCAGAGGAATGCCCTTTCTCTCCTTACTTTTCACCCCATGAGCCTCAGAAGTTTGCTGCTGTTCATAAAGTGTTTGGTGCAAGCAATGTCTCCAAGATGCTAATGGAGGTGGCCGAGAGCCAAAGAGCAGATGCTGCAAACAGTCTGGTTTATGAAGCAAACCTGAGGCTGAGGGACCCAGTTTATGGATGCATGGGTGCAATATCAGCTTTGCAACAACAAGTTCAGTCATTACAGGAAGAGCTAAATGCTGTGAGAGGTGAGATTCTCAAGTATAAGTATAGAGAAGCCGCTAGTCAGATCATTTCTTCTCATCATCATCATGGTGGGGCTTTGGTTTCTTCTGTGGAGGAACCTCAACCACCTCCTCAACCTCCAAAACCACCTTCATTGACTTCTTCTGCTTCTGTTGTTCTTTCATCCTTGTCTTCATCTTCCAGTTCTTCTGTATACACTCCCCCTAATAGTGCAATTAGCCATGGATCTATCTCCAGCGAAAATGTCCCTTACTTTGTTTGA 840 0.4452 MQPHFLFLLCTSFPILRSITSPLVRVCASRKSFLLKAPPHRSRQSRGMLGYPETERAEEIAKNTGETVSSEASSQMGRRNFYGPAASGTTLNSVIPCAACKLLRRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVAESQRADAANSLVYEANLRLRDPVYGCMGAISALQQQVQSLQEELNAVRGEILKYKYREAASQIISSHHHHGGALVSSVEEPQPPPQPPKPPSLTSSASVVLSSLSSSSSSSVYTPPNSAISHGSISSENVPYFV 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1497 279 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 95 234 - -
Acco10g1497 279 Coils Coil 175 202 - -
Acco10g1497 279 MobiDBLite consensus disorder prediction 215 273 - -
Acco10g1497 279 Pfam Lateral organ boundaries (LOB) domain 96 192 IPR004883 -
Acco10g1497 279 MobiDBLite consensus disorder prediction 238 273 - -
Acco10g1497 279 ProSiteProfiles LOB domain profile. 95 196 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1497 Acco-ChrAcco10 28747562 28748761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1497 55 206 AS2 family AT2G30340 69.737 6.92e-72 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco10g1497 LOB 2.8e-40 No_clan