Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1494 ATGGAGAACAGATCAACTGTCTTAATGGGAAGATATGAATTAGGAAGATTGCTGGGTCAAGGTACCTTTGCAAAAGTGTACTATGCACGAAGCACATCAACTAATCAGAGTGTGGCTGTTAAGTTAATTGATAAAGACAAGGTTATGAAATCTGGGCAAGCAGAGCACATCAAGCGTGAAATATCCATCATGAGGAAGGTTAGACATCCCTATATTATACAGCTTTTTGAGGTTATGGCCACCAAGAGTAAGATTTACTTTGTTATTGAATATGCTAAAGGTGGTGAACTCTTCACTAAGTTATCTAAAAAGGGAAAGTTCAAAGAGGAGGTTGCACATAAATATTTCTGGCAGCTGATCAATGCAGTTGAGTTTTGTCACAGCAGAGGTGTGTACCACCGAGATATTAAACCAGAGAACCTTTTGTTGGATGAATATGGGAATTTGAAGGTTTCTGATTTTGGGTTAAGTGCTCTGGCGGAATCCAAGCGGGAAGATGGTCTGCTGCATACTACTTGTGGCACACCTGCCTATGTTGCTCCTGAAGTCATCAAAAGGAGAGGGTATGATGGTGCCAAAGCTGATGTCTGGTCTTGCGGGGTAGTATTGTTTGTATTATTGGCAGGTTATCTCCCTTTTCATGATCCAAATTTGATTGAGATGTATAGGAAGATTGACAAAGCAGAATTTGAATATCCTAATTGGTTCTCACCAGAAGTTCACACACTTTTAAGCAAGATATTGGATCCAGATCCTGATACTAGGATTTCCATGGAAAAGATTAGGGAGTGTTCTTGGTTTAAGAAAGGACCAAGTTCTAAACCTAAAAAACATGTACTGGAAAAGAAGGCTGCCTCTTCATCGGGTGAAAATCCTTCAAATCAAAGCAGCGAAGCAGAAGCAAAGCAGGAGTCAGTTGTACCAACTAGTATAAATGCATTTGATATCATATCCCTTTCTGCTGGATTTGATCTTTCTGTATTCTTTGAAGACAGTTTTAAGAAGAGAGAAGCAAGATTTACCTCAAGACAACCCGCATCGGCTATCATCTCGAAGCTGGAAGAGACTGCCAAGCGTCTGAAGATGAAAATAAAGAAGAAAGCCGCAGGTTTGTTGAAGCTACAGGGCCTCAGGGAAGGCAGAAAGGGTATTTTGTCCATTGACGCAGAAATATTTGAGATTGCTCCGTATTTCCATCTGGTGGAGGTGAAAAAATCAGATGGAGATACATTGGAATTTCAGAAAATACTGAAAGAAGGTATAAGGCCTGCTCTTCAGGATATTGTCTGGGTTTGGCAAAGTGATGACCAAGAACAGCAATCACAGCCACAACTGCAGATACATGACCCGCCGCCACAAGAATCACAGCACTAA 1374 0.409 MENRSTVLMGRYELGRLLGQGTFAKVYYARSTSTNQSVAVKLIDKDKVMKSGQAEHIKREISIMRKVRHPYIIQLFEVMATKSKIYFVIEYAKGGELFTKLSKKGKFKEEVAHKYFWQLINAVEFCHSRGVYHRDIKPENLLLDEYGNLKVSDFGLSALAESKREDGLLHTTCGTPAYVAPEVIKRRGYDGAKADVWSCGVVLFVLLAGYLPFHDPNLIEMYRKIDKAEFEYPNWFSPEVHTLLSKILDPDPDTRISMEKIRECSWFKKGPSSKPKKHVLEKKAASSSGENPSNQSSEAEAKQESVVPTSINAFDIISLSAGFDLSVFFEDSFKKREARFTSRQPASAIISKLEETAKRLKMKIKKKAAGLLKLQGLREGRKGILSIDAEIFEIAPYFHLVEVKKSDGDTLEFQKILKEGIRPALQDIVWVWQSDDQEQQSQPQLQIHDPPPQESQH 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1494 457 Gene3D Transferase(Phosphotransferase) domain 1 92 294 - -
Acco10g1494 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Acco10g1494 457 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Acco10g1494 457 Pfam Protein kinase domain 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1494 457 MobiDBLite consensus disorder prediction 269 302 - -
Acco10g1494 457 CDD CIPK_C 312 426 - -
Acco10g1494 457 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Acco10g1494 457 SUPERFAMILY Protein kinase-like (PK-like) 8 306 IPR011009 -
Acco10g1494 457 FunFam Non-specific serine/threonine protein kinase 2 300 - -
Acco10g1494 457 FunFam Non-specific serine/threonine protein kinase 306 430 - -
Acco10g1494 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 423 - -
Acco10g1494 457 SMART serkin_6 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1494 457 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Acco10g1494 457 ProSiteProfiles Protein kinase domain profile. 12 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1494 457 MobiDBLite consensus disorder prediction 286 302 - -
Acco10g1494 457 Pfam NAF domain 308 366 IPR004041 GO:0007165
Acco10g1494 457 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Acco10g1494 457 Gene3D Kinase associated domain 1, KA1 306 431 - -
Acco10g1494 457 MobiDBLite consensus disorder prediction 435 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1494 Acco-ChrAcco10 28728216 28729589 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1494 1 441 CBL-interacting serine-threonine protein kinases AT5G58380 64.348 0.0 614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco10g1494 Pkinase 1.8e-76 CL0016