Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1487 ATGGGTAATCACAGGTTCAAATTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCATCAAGGAAGCAGAAAGGTTCTCATGCTACTGTGAAGAACAGAGCAGGCTCACCGGTGATGTCCCAGAGGTCGCCCCCAAATTGTTTGCATTATTTCCCCACAGAGCCTTACGGAGCTGGTATGCTTTTTAACTCACCAATTCACACCAAAGTCACAGACTTTTCATTCACTGATTCGCCAAGAAGGTCATCATCCAAGAGAAGAGCTCAGAGGAAAACCATTTACAAGCCTTCTCCCTCAGTTCTGTCCTCTGTCTCAACCGCTTGCAGCTGCCATCGGACTCAGCCAAATCAAGCCGAGTCCCCGGATTTCTATGCCTCTTCCCTTGAGAGTTCTTCCTCTGAATTAGATATCTATGAATGTATTACATCTGAGGCTGATGAGTGTGATAGCCCAGCAGCTCCTCACATGTTCAATGGACTCTCCCCTGATTGCAGTTGCAGGGTTAGTTCTTCCACTAATGATATCATCCTCGACATGAACACTGAATCATTTGCTGCTGTGAATCCTGAAAAGCTAGATGGGTTTGATACAATTTCAAAATCAGGCCTTCCTCCTATATTGACAAAACCAGCGAGGTTTGATGATCAGGCCATTGAAGCACCTTACTTGAAATGTTCATCTAAGTTGGAAGAAAGTGGCACAACTGCAACTCCAAAGTCCTCTTCTAACTCAAGAGGAATAAGACTTAGAGTCAATTCAGCAAAACTTGCAAGTAGGAAAGTTCAAGCCTGTGCAAGAAGGAGTGTATCATCATCGTCATCAAGTGCATGCAAGGTCTCAAGGAAAACAGGGTTTCCAGAAGGCTTTGCAGTTGTCAAGTCCTCAATTGATCCACAAAGAGACTTCAAGGAATCAATGGTGGAGATGATCAGGGAGAAGAATGTATGGTCATCAGAAGATTTGGAAGATCTTCTAGCTTGCTATCTCTCACTTAACTCAAAAAAATACCATGAACTCATAATCAAAGCATTTGAGCAAACTTGGTTTGACTTGGCTCAACTGAGAATGTAA 1092 0.4304 MGNHRFKLSDMIPNAWFYKLKDMSRSSRKQKGSHATVKNRAGSPVMSQRSPPNCLHYFPTEPYGAGMLFNSPIHTKVTDFSFTDSPRRSSSKRRAQRKTIYKPSPSVLSSVSTACSCHRTQPNQAESPDFYASSLESSSSELDIYECITSEADECDSPAAPHMFNGLSPDCSCRVSSSTNDIILDMNTESFAAVNPEKLDGFDTISKSGLPPILTKPARFDDQAIEAPYLKCSSKLEESGTTATPKSSSNSRGIRLRVNSAKLASRKVQACARRSVSSSSSSACKVSRKTGFPEGFAVVKSSIDPQRDFKESMVEMIREKNVWSSEDLEDLLACYLSLNSKKYHELIIKAFEQTWFDLAQLRM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1487 363 ProSiteProfiles OVATE domain profile. 298 357 IPR006458 -
Acco10g1487 363 MobiDBLite consensus disorder prediction 80 107 - -
Acco10g1487 363 Pfam Transcriptional repressor, ovate 302 358 IPR006458 -
Acco10g1487 363 NCBIfam uncharacterized plant-specific domain TIGR01568 296 359 IPR006458 -
Acco10g1487 363 MobiDBLite consensus disorder prediction 36 51 - -
Acco10g1487 363 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 102 359 IPR038933 GO:0045892
Acco10g1487 363 MobiDBLite consensus disorder prediction 27 51 - -
Acco10g1487 363 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1487 Acco-ChrAcco10 28678489 28679580 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Acco10g1487 Ovate 4.5e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1487 10 28678489 28679580 Acco05g0836 05 15109729 15110913 CCT
Acco10g1487 10 28678489 28679580 Acco10g1487 10 28678489 28679580 ECH