Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1486 ATGCGTGGCAGTAAAGAGCATAATATTAAAGGAGACCACGGTTATGTGGAAACTGACCCAAGTGGTCGATATGGCAGGTTTGGAAAAATTCTTGGAAAAGGAGCAATGAAGACAGTATACAAAGCTATTGATGAGGTCCTTGGAATAGAGTTAGCATGGAACCAGGTCAGACTCAATGAAGCACTTCGCACACCAGATGATTTGCAGCGGCTTTACTCAGAGGTTCATCTTCTCAGTACCCTCAAGCACCAATGCATCATAAGATTCTACACCTCCTGGATTGATATTGAAAACAAGACCTTCAACTTCATCACAGAAATGTTCACTTCAGGGACATTGAGAGAATACAGGAAGAAATATGTGCGAGTAGGCTTACAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAAGGTCTTGTTTACCTACATGACCATGATCCTCCAGTAATTCATAGGGACCTCAAATGCGATAATGTATTTGTCAATGGCCATCTTGGACAAGTGAAAATCGGTGATTTAGGACTAGCTGCTATTCTTCGTGGTTCCCAGCCTGCCCACAGTGTTATAGGCACGCCAGAGTTCATGGCTCCAGAATTATATGAAGAAGAATACAATGAACTCGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAAATGCTTACATCTGAATATCCATATGGTGAATGTGCTAATCCTGCACAGATCTACAAAAAAGTAACATCGGGAAAGCTACCAGCAGCACTTTTTCGGATTGAAGACCCAGAAGCACAGAAATTTGTTAGAAAATGCTTGGTTGCTGCAGCAGAAAGACCATCAGCAAAAGAATTATTGCTTGATCCTTTTCTCTCATCTAATGACGCGTTGTCAAACACAAAGTTGGAGATTCAAAAGCCACTGTGGAATGACATTGAGATAGAAAAGTTGCATTTGACCGATGGTTCACAAAGGACTGGGATGAAAATCACTGGGAAGCTGAATCCAGAGGATGATACAATATTTCTCAAAGTGCAAATTACTGATAAAGATGGTTCTGCAAGGAACATTTATTTTCCCTTTGACATTTTAACGGATACTCCCATTGATGTTGCAATGGAGATGGTGAGAGAGTTGGAGATCACCGATTGGGAGCCATTTGAAATCTCTAGCATGATTGAAGCAGAGATATCTGCTCTGCTGCCACAGAGAAGGAAGAGGGACTGTTCAGATACCTTTCATATGTTCAATTATCAGAATGATGACAACAATGAACCTCGATATCATTTTGGCTCATTATCTTCTTGTTCATCATCCTTAGAATCAGTACCAGGCATAGTCACAAGAGCTGAGGAACTACCCAATGGATATCACTGGCTCCATGATGAATTGATTGATGATTCCTGTTCCCGATGCTCTTCACAGGGGACATATTCCAACTTGAATTATGCTTCTGCGGATGACCAGGAGCAAAATGTGATTTCTACCAGAAAAGATAAAGCATCAAACACTAAGAGTCACAAATGTAAAATGTTTTCCCCTGGTGAAGACCAAAGCACTGAATTGTCTCCGTCTGGAACAAGTTGCAACCACTGTAAAATTTTAGTGGGACCACATGCTGCTGCATCTACTAGCAAAAACAAGAAGATAGACAATCGTAGCTTGACAAGGAACAATTCATTTATTGATGTACATAGCCAGATGCTACACCGTTCCCTAGTTGAGGAGGTAAGCAAGAGACGTTTGTTCAAGACAGTTGGAGCAGTGGAAAATATTGGATTTCAGAATCCTCTTGAGGCTCCCAGAAGAAAATCACAACCACGGTCTGGTGGTGGTTTAGATGTGAAATCTTCAAGGGGTGGCAAGGGACAAGCGCTTCGGAGCTATTCTTTGAACATCAGATGCGAAAGAGATAGATAG 1896 0.4151 MRGSKEHNIKGDHGYVETDPSGRYGRFGKILGKGAMKTVYKAIDEVLGIELAWNQVRLNEALRTPDDLQRLYSEVHLLSTLKHQCIIRFYTSWIDIENKTFNFITEMFTSGTLREYRKKYVRVGLQAIKSWARQILQGLVYLHDHDPPVIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSQPAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYGECANPAQIYKKVTSGKLPAALFRIEDPEAQKFVRKCLVAAAERPSAKELLLDPFLSSNDALSNTKLEIQKPLWNDIEIEKLHLTDGSQRTGMKITGKLNPEDDTIFLKVQITDKDGSARNIYFPFDILTDTPIDVAMEMVRELEITDWEPFEISSMIEAEISALLPQRRKRDCSDTFHMFNYQNDDNNEPRYHFGSLSSCSSSLESVPGIVTRAEELPNGYHWLHDELIDDSCSRCSSQGTYSNLNYASADDQEQNVISTRKDKASNTKSHKCKMFSPGEDQSTELSPSGTSCNHCKILVGPHAAASTSKNKKIDNRSLTRNNSFIDVHSQMLHRSLVEEVSKRRLFKTVGAVENIGFQNPLEAPRRKSQPRSGGGLDVKSSRGGKGQALRSYSLNIRCERDR 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1486 631 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1486 631 SUPERFAMILY Protein kinase-like (PK-like) 27 304 IPR011009 -
Acco10g1486 631 MobiDBLite consensus disorder prediction 496 516 - -
Acco10g1486 631 FunFam Probable serine/threonine-protein kinase WNK1 10 106 - -
Acco10g1486 631 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1486 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Acco10g1486 631 MobiDBLite consensus disorder prediction 589 623 - -
Acco10g1486 631 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
Acco10g1486 631 Gene3D Transferase(Phosphotransferase) domain 1 108 291 - -
Acco10g1486 631 Gene3D - 317 401 - -
Acco10g1486 631 CDD STKc_WNK 23 283 - -
Acco10g1486 631 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1486 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 598 - -
Acco10g1486 631 FunFam probable serine/threonine-protein kinase WNK9 108 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1486 Acco-ChrAcco10 28672594 28676797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1486 15 600 MAP Kinase Kinase Kinase AT5G58350 55.424 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Acco10g1486 Pkinase 6.8e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1486 10 28672594 28676797 Acco10g1486 10 28672594 28676797 ECH