Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1481 ATGGGTACCAGCCTAGAATGTGAACCAGTAGCCATCTATATTTCTTGCGACGCGAGGAAGAAGAAAGGAGAGGCCAATGCATTCCTTCTGGGCTGTGTGAAAGAAAGGATAGAAAGTTCCACAACACATGGCTTAGAACGAGCACGCAAGGTTTTGCTCTCAGAGATGCAAGATCCACCTTCAAGCCTTAACCCCAATCCCTCTTCTCACAATGTTAATACCAATGCCGCTTCTCAATTCCCGCCACCGCAGCCCGCCGCTGCCGTTTCCCCGCCGAAGGTGACTCCTGCCGCCTCCTCTTCGTCTTCTTCGCTCTTTATGAGGGGAGGAGCTGCCGCCACCGGCATTGGTGGGGGCCACCCACTCCACCACCACCACCACAGGAGGGCCCACTCCGAGGTTAACTTCCGGTTGCCTGATGACATGATGGATCTGTCGACGTCCGATCCGTTCAATGGTGGTTCATCTACGGCTAGTCTTGAAGAGATCGGATCCGAGGATGACCTCTTCTCTACTTACATTGATGTTGACAAACTCGGAGGTGCTAACGGATCGGGAAGTGGTGGCAATGGATCAGATCAGAATGGCAGTGGGAGTGGGAATGGGAATGGGAATGGCGTCGGCACAAGCAATCAGAACGAAAGCGAGAAGAGCCCGAGTGCAAGGCCAAGACACAGGCATAGTAGCTCTGTGGATGGGTCGACTTCTACAAGTATGTTTGGAGAGATTATGGAGGCAAAAAAAGCTATGCCTCCAGATAAGTTAGCTGAACTGTGGACGATTGATCCCAAGCGTGCCAAGAGAATCCTAGCAAATCGACAATCAGCTGCTCGTTCAAAAGAGAGGAAAGCTCGTTATATTCAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCCCAACTTACACTGTACCAGAGGGACACAACAGGTCTGAGCACTGAAAATACAGAGCTTAAGTTTCGTCTACAAGCCATGGAACAACAGGCACAGCTTCGAGATGCTCTAAATGAAACATTGAAGAAGGAAGTTGAGAGACTTAAGATTGCAACTGGGGAGATGATGAGCCCTTCCGAATCATTTAATCTGGGAATGCACCAGATGCAATTTACAGCTTCAAACTTCTTTCCACTTCCACCTCCGCCAGGGCCTCCTGGTCACCAGAGCTTGCAGTTGCCATCATTCAATCACTCGTCTAGTATGGCAGCTCATCAATATCAACTGCAACAAACAAACTCTCATCATTTCTCTGAAATGATGCAGAATGACCAACTTGGTCGTTTTCAAGGGCTTGACATCAGTAGCAAAGGATCACCCGTTGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACAACATTTTAA 1392 0.4921 MGTSLECEPVAIYISCDARKKKGEANAFLLGCVKERIESSTTHGLERARKVLLSEMQDPPSSLNPNPSSHNVNTNAASQFPPPQPAAAVSPPKVTPAASSSSSSLFMRGGAAATGIGGGHPLHHHHHRRAHSEVNFRLPDDMMDLSTSDPFNGGSSTASLEEIGSEDDLFSTYIDVDKLGGANGSGSGGNGSDQNGSGSGNGNGNGVGTSNQNESEKSPSARPRHRHSSSVDGSTSTSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKFRLQAMEQQAQLRDALNETLKKEVERLKIATGEMMSPSESFNLGMHQMQFTASNFFPLPPPPGPPGHQSLQLPSFNHSSSMAAHQYQLQQTNSHHFSEMMQNDQLGRFQGLDISSKGSPVVKSEGPSLSASESSTTF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1481 463 MobiDBLite consensus disorder prediction 56 131 - -
Acco10g1481 463 Gene3D - 263 316 - -
Acco10g1481 463 SMART brlzneu 260 324 IPR004827 GO:0003700|GO:0006355
Acco10g1481 463 MobiDBLite consensus disorder prediction 435 463 - -
Acco10g1481 463 Pfam bZIP transcription factor 264 319 IPR004827 GO:0003700|GO:0006355
Acco10g1481 463 MobiDBLite consensus disorder prediction 94 108 - -
Acco10g1481 463 CDD bZIP_plant_RF2 265 314 IPR044759 GO:0003700|GO:0006355
Acco10g1481 463 MobiDBLite consensus disorder prediction 446 463 - -
Acco10g1481 463 SUPERFAMILY Leucine zipper domain 264 315 IPR046347 GO:0003700|GO:0006355
Acco10g1481 463 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 74 427 - -
Acco10g1481 463 MobiDBLite consensus disorder prediction 184 238 - -
Acco10g1481 463 MobiDBLite consensus disorder prediction 57 81 - -
Acco10g1481 463 Coils Coil 280 307 - -
Acco10g1481 463 MobiDBLite consensus disorder prediction 185 217 - -
Acco10g1481 463 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 262 325 IPR004827 GO:0003700|GO:0006355
Acco10g1481 463 Coils Coil 332 359 - -
Acco10g1481 463 FunFam probable transcription factor PosF21 263 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1481 Acco-ChrAcco10 28621972 28625601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1481 121 463 bZIP Transcription Factor Family AT2G40620 52.926 4.14e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco10g1481 bZIP_1 7.3e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1481 10 28621972 28625601 Acco10g1481 10 28621972 28625601 ECH