Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1464 ATGTCCCTTCACTCTAATCATCCCCATCCTCAACCACCTGAGGATTACCCAGAAACATGCACACCCGCCTATCCGAGGCTCCTCCGAATCATCCTCACCGATCACGACCTCACTGATTCTGATTCTGACTCTGAATCCTCCCTCAATGATCCATCAAGAGTCAAGCGCCTCATCTTCCTCCATCTTCCCTCTCCTGATCCTCCTTCTTCCTTTGCTTCTCCCCGCACACCGGCCAAAACCAACCCCGCCCGATTCAGGCGGCGCTGCGTTTCCTCCGCCTCTCGCCGGCATAAGAAGTTCAGAGGCGTTCGCCAGAGACCTTGGGGTCGCTGGGCCGCCGAGATCCGGAACCCGAACCTAGGAAAACGGGTCTGGCTTGGAACCTTCGACACGGCGGAGGAAGCCGCGTCTGAGTATGACAGGGCAGCTCTGAAGATCAAGGGTCCTCACGCAGTCACCAACTTCCCGTGCTCCGTCATTACGGAGGACACAGCGACGCCGGAAGCTTCCACGGTTGAAAGTCCCAGCACTGAAGGAACGGTTTCGTACTCCGACACGGCGGCGTCGCCCACATCTGTTCTCCCCCATGATGGAGACTCGATGGCGTTCGACGATTTCCGTTACGGCGATGTGGATGCGTTCGGGTTCGACATAGACGGGCCGCTGGGTGTGCCAGACATGAACTTGATGTTGCCGAGTCAACCGTTTCGCAAGGAGGAGTTCGGCGAGTTTGACCTCGATGACTTCTTTGACGTGGCCTAA 762 0.5735 MSLHSNHPHPQPPEDYPETCTPAYPRLLRIILTDHDLTDSDSDSESSLNDPSRVKRLIFLHLPSPDPPSSFASPRTPAKTNPARFRRRCVSSASRRHKKFRGVRQRPWGRWAAEIRNPNLGKRVWLGTFDTAEEAASEYDRAALKIKGPHAVTNFPCSVITEDTATPEASTVESPSTEGTVSYSDTAASPTSVLPHDGDSMAFDDFRYGDVDAFGFDIDGPLGVPDMNLMLPSQPFRKEEFGEFDLDDFFDVA 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1464 253 Gene3D AP2/ERF domain 98 158 IPR036955 GO:0003700|GO:0006355
Acco10g1464 253 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 25 195 - -
Acco10g1464 253 MobiDBLite consensus disorder prediction 1 20 - -
Acco10g1464 253 MobiDBLite consensus disorder prediction 65 86 - -
Acco10g1464 253 ProSiteProfiles AP2/ERF domain profile. 99 156 IPR001471 GO:0003700|GO:0006355
Acco10g1464 253 CDD AP2 98 156 IPR001471 GO:0003700|GO:0006355
Acco10g1464 253 PIRSF PTI6 13 253 IPR017392 GO:0003700
Acco10g1464 253 FunFam Ethylene-responsive transcription factor 2 98 157 - -
Acco10g1464 253 MobiDBLite consensus disorder prediction 165 191 - -
Acco10g1464 253 SUPERFAMILY DNA-binding domain 99 158 IPR016177 GO:0003677
Acco10g1464 253 Pfam AP2 domain 99 148 IPR001471 GO:0003700|GO:0006355
Acco10g1464 253 PRINTS Ethylene responsive element binding protein signature 100 111 IPR001471 GO:0003700|GO:0006355
Acco10g1464 253 PRINTS Ethylene responsive element binding protein signature 122 138 IPR001471 GO:0003700|GO:0006355
Acco10g1464 253 SMART rav1_2 99 162 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1464 Acco-ChrAcco10 28396431 28397192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1464 26 196 AP2-EREBP Transcription Factor Family AT4G27950 44.382 6.32e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco10g1464 AP2 3.9e-15 CL0081