Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1461 ATGCAAGTGATTTACTGTGCGAAAATCTTCCCCGGTTCCTTCATACCAGCCGTTACTCGTCACTCAGCTTGTAGATCTGGGTCAGTCGGATCTGAAGGTAGAAAACCTGCGCTGGTCGTGGTTGGTGAGGATAAAATGGAGATATACAAGTTCGAGTTATCAGTCACTCAATTTAATTCAGATTCTGTGAATTATAGCAAACAACTCTCCATGAGGTTCTATTCACCTTCATTGCAACCTTTCCTTTTGGTCATTGCTATTCTTTTTCCTCTGGCTACTGCTGACTTAAATTCAGAAAAGCAAGCCCTTCTTACTTTTGCTAATGCTGTCCCCCATCGCCGGAACTTTAAGTGGGATCGATCCACCTCTGTCTGTAAGTCTTGGGTTGGCATCACTTGCAATCCAAATGGTACTCACGTTACCTCTGTCAGGCTACCAGGCGTTGGACTTGTTGGATCCATCCCATCAAATACACTTGGAAAGCTTGACAACCTTAAAACCATAAGTCTGCGATCCAACCTACTCAGTGGAAATTTACCTAGTGATATTACTTCTCTTCCTTCTCTCCAGTATCTCTACCTCCAGCATAATAACCTTTCAGGGGATATACCTACCTCATTTTCACCCCAACTAAATGCACTTGATCTGTCTTATAATTCTTTCACCGGTGTTATTCCAGAGACATTACAAAATTTAACAGAACTGACTAGATTATACCTTCAGAACAACTCCCTTTCTGGACAGATACCCAATCTCAATGTCCCTAAGCTCAAGCTTTTGAACTTAAGTTACAACCAGTTGAATGGCTCTATCCCGACAGCTCTTCAGAAATTTCCTAATTCATCCTTTGAAGGGAATTCTCTCTTGTGTGGACAACCTCTAAAACCTTGCTCTTCTGTCCCTCCTACACCTCCTCCTGCCTTACCTCCGGCCCCACCATCGGCTCCAAAAAAACAAAGCTCCAAACATATATTGAGTAAGGTAGCTATCATTGCAATCGCTGTTGGAGGAGCTGTTCTGCTGTTACTTATAGCTATTGTTATTCTTCTCTGCTGTTTGAAAAAGAAAGATGACGGAAGATCCAGTGTAATTAAAGGGAAGGGTCCTAGCGGTGGGAGGGGTGAGAAGCCAAAAGAAGAGTTTGGCAGTGGGGTGCAGGAACCAGAGAAAAACAAGTTGGTTTTCTTCGAGGGCTGTTCTTATAATTTTGATCTTGAGGATTTGCTAAGAGCTTCAGCTGAAGTTCTGGGAAAGGGTAGCTATGGCACTGCATACAAGGCTGTGTTGGAGGAATCAACTACTGTTGTGGTGAAAAGGTTGAAAGAAGTAGTGGTGAGCAAGAGAGACTTTGAACAGCAGATGGAGACTGTAGGAAGGGTTGGGCAGCATCCAAATGTTGTACCCCTTCGTGCTTATTATTATTCAAAGGATGAGAAACTTTTAGTCTATGACTATATCCCAGGAGGCAACCTGTCGTCCCTATTGCATGGTAGTAGGTCAGGTGGAAGAGCTCCGTTAGATTGGGATTCCCGATTGAAGGTCTCCCTAGGAGCTGCCCGAGGAATTGCCCATATGCATTCTGTTGGGGGTCCAAAATTCACTCATGGAAATATTAAATCCTCAAACGTCCTCATCCAAGATAATGAAGCCTGCATTTCTGATTTTGGCTTGACCCCACTCATGAATGTTCCAGCAGCCCCCTCCAGAGCTGCAGGTTATCGTGCTCCCGAAGTGATTGAGATGCGTAAACACACTCATAAATCAGATGTGTACAGCTTCGGTGTCCTCCTTCTGGAAATGCTTACTGGGAAAGCACCTATCCAGTCACCAGGCCGTGATGACATGGTTGATCTCCCTAGATGGGTCCATTCTGTTGTTAGGGAGGAATGGACAGCCGAGGTCTTCGATGTGGAGCTGATGAGGCATCAAAACATTGAAGAAGAAATGGTTCAACTGTTGCAAATTGCCATGGCCTGTGTAACAAAGATGCCGGATATGCGACCTAGCATGGATGATGTAGTGAGAATGATTGAAGAGATCCGGCAATCTGACTCAGAGAACCGGCCATCTTCAGAAGAGAATAAATCCAAGGACTCCAATGTGCAGACTCCATAA 2115 0.4449 MQVIYCAKIFPGSFIPAVTRHSACRSGSVGSEGRKPALVVVGEDKMEIYKFELSVTQFNSDSVNYSKQLSMRFYSPSLQPFLLVIAILFPLATADLNSEKQALLTFANAVPHRRNFKWDRSTSVCKSWVGITCNPNGTHVTSVRLPGVGLVGSIPSNTLGKLDNLKTISLRSNLLSGNLPSDITSLPSLQYLYLQHNNLSGDIPTSFSPQLNALDLSYNSFTGVIPETLQNLTELTRLYLQNNSLSGQIPNLNVPKLKLLNLSYNQLNGSIPTALQKFPNSSFEGNSLLCGQPLKPCSSVPPTPPPALPPAPPSAPKKQSSKHILSKVAIIAIAVGGAVLLLLIAIVILLCCLKKKDDGRSSVIKGKGPSGGRGEKPKEEFGSGVQEPEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTVVVKRLKEVVVSKRDFEQQMETVGRVGQHPNVVPLRAYYYSKDEKLLVYDYIPGGNLSSLLHGSRSGGRAPLDWDSRLKVSLGAARGIAHMHSVGGPKFTHGNIKSSNVLIQDNEACISDFGLTPLMNVPAAPSRAAGYRAPEVIEMRKHTHKSDVYSFGVLLLEMLTGKAPIQSPGRDDMVDLPRWVHSVVREEWTAEVFDVELMRHQNIEEEMVQLLQIAMACVTKMPDMRPSMDDVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1461 704 MobiDBLite consensus disorder prediction 679 704 - -
Acco10g1461 704 MobiDBLite consensus disorder prediction 371 385 - -
Acco10g1461 704 CDD STKc_IRAK 416 680 - -
Acco10g1461 704 Gene3D Transferase(Phosphotransferase) domain 1 486 703 - -
Acco10g1461 704 PANTHER OS05G0588300 PROTEIN 83 692 - -
Acco10g1461 704 MobiDBLite consensus disorder prediction 297 319 - -
Acco10g1461 704 SUPERFAMILY L domain-like 110 297 - -
Acco10g1461 704 Gene3D Ribonuclease Inhibitor 253 298 IPR032675 -
Acco10g1461 704 MobiDBLite consensus disorder prediction 297 316 - -
Acco10g1461 704 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 486 692 - -
Acco10g1461 704 Pfam Leucine rich repeat 149 199 IPR001611 GO:0005515
Acco10g1461 704 Pfam Leucine rich repeat 205 245 IPR001611 GO:0005515
Acco10g1461 704 Gene3D Ribonuclease Inhibitor 95 252 IPR032675 -
Acco10g1461 704 Pfam Protein kinase domain 413 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1461 704 Gene3D Phosphorylase Kinase; domain 1 378 485 - -
Acco10g1461 704 MobiDBLite consensus disorder prediction 360 385 - -
Acco10g1461 704 Pfam Leucine rich repeat N-terminal domain 97 134 IPR013210 -
Acco10g1461 704 ProSitePatterns Protein kinases ATP-binding region signature. 416 438 IPR017441 GO:0005524
Acco10g1461 704 Pfam Leucine Rich Repeat 256 278 IPR001611 GO:0005515
Acco10g1461 704 FunFam pollen receptor-like kinase 1 378 485 - -
Acco10g1461 704 FunFam Leucine-rich repeat receptor-like protein kinase 98 208 - -
Acco10g1461 704 MobiDBLite consensus disorder prediction 679 695 - -
Acco10g1461 704 FunFam Leucine-rich repeat receptor-like protein kinase 209 297 - -
Acco10g1461 704 ProSiteProfiles Protein kinase domain profile. 410 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1461 704 SUPERFAMILY Protein kinase-like (PK-like) 414 678 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1461 Acco-ChrAcco10 28362164 28366103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1461 73 702 Receptor kinase-like Gene Family AT5G58300 69.702 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco10g1461 Pkinase 3.4e-36 CL0016