Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1456 ATGTATCTTTCGAAGGTCTGGCAGTATGAAGCTGTATTCAGCTTATGGTTCTGTTGCTGGTCGCTTCTGGTTACCGCGCAGGGTTCTGTCACTGACCCCAATGAAGTTGCCGCATTGAGAGCCATCAAATGGCGTTTGATTGATCTTAATGGAAATCTGAGCAACTGGAATGGTGGAGATCCATGTACATCTAAATGGAGAGGGGTTAATTGTTTCAGTAGTCCACGGGCTGATAACTATTTACATGTTCAAGAACTGCGACTACTGAATTTGAACTTGTCTGGAACTTTGGCACCAGAGATTGGAAATCTATCTTACATGGAAATATTGGACTTTATGTGGAACAATATAGGTGGGAGCATACCAAAGGAAATTGGCAACATCAAAAGTTTGCGACTCCTGCTTCTAAATGGAAACAACTTAACAGGTCCGCTTCCCGAAGAGCTTGGTTATCTTCCGAATTTGACTAGAATGCAAATTGATCTGAACAATATAACAGGACCTATTCCTACATCGTTTGCAGAACTAAACAGTACAAAGCACTTTCACATGAACAATAACTCACTTACTGGACCAATCCCTCGAGAGTTTTCCCGCTTGTCAAGCCTTGTTCACCTCCTTCTTGACCATAACAATTTATCAGGAGATCTTCCACACGAGCTCTCCCAGATGCCACGCATACGCATAATCCAGCTTGATAACAACGATTTTGGCGGGGCTAACATTCCAGATTCATATAGCAACATTACAACATTGTTGAAGTTGAGCCTTAGGAATTGCAACTTACAAGGACCAATTCCTGATTTTAGCAGGGTACCGCACCTTCTTTATCTTGACCTCAGTTCCAATCAATTGAATGGACCAATTCCTTCTAATAAGCTTTCTGAAAGAGTCACAACCATTGATTTGTCAAACAACAAGCTAGCTGGAAATATTCCACCCAACTTCTCTGCTCTACCAAATCTTCAACTATTGGATTTTCAAAATAATAATCTTTTGGGCATATCAGGCACTATTGATCTCCCCCCTAACGTCACACTCAGGCTTGCGGGAAATCCTCTTTGTTCCAATAACACTCTAGTTCATCTCTGTGGATCTGCAAGTGACAATGACACGAACCACTTGAGTCTGACGGACTCAACTGTTAACTGTCCCCCTCAAGAATGCCTTCCTCCTTATGAATATTCCAAAACATCTTCTGTAAAGTGTTTTTGTGCAGCGCCTTTGCTCATTGATTATCGACTGAAAAGTCCTGGGTTTTACGAGTTTCATCCATTCCAGACAAAATTTGAGAACTTCCTGGCATCCAATTATACTTTAACGATTAACCAGGTTGATATTGGCACTCCTGAATGGGATGGACTTCGACTGAAAATGTACTTGAAGCTTTTTCCGGAACCCATTGATAACATAAGCTACCTTACTTTCAATGAAAGCGAGGTTCAGCGACTTTATAGCATGTTCACAGGATGGGTTATTTCAGATGATGAGTTTTTCGGACCTTATGAACTGCTCGACTTCCCTCTTGTGGGTCCTTACAGAGATATGTTGTTTGGCCCCAATACAAGTTCAGGGATGAGCAAGGGAGCACTGGCTGGCATTATCTTAGGGACAATTGCCGGTACAGTTACGTTATCTGCAATTGTGACTCTTCTCATCTTGAGGGCACGGATGAGAGATTACCATGCACTTACATCAAGCCGACAACTGTCTAGAATATCAATAAAAATTGATGGTGTGAGGAGCTTCACTTTTGAAGAAATGACCTTGGCTACTAACAATTTTAGTGACTCCAGTCAAGCTGGCCAAGGGGGCTATGGGAAAGTTTATAGAGGTACTCTCACCGATGGCACTGTTGTAGCAATTAAACGTGCGCGGGCGGGATCACTGCAAGGCCGGAGGGAGTTCCTAACAGAAATACAGTTACTATCAAGGTGTCATCATCGCAACCTCGTGACTTTGGTTGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGCACGCTAAGGGATCATCTTTCTGCTGATTCGAAACAACCTCTGAGTTTTGATACGAGATTGAGGATTGCACTAGGATCAGCCAAGGGCATCCTGTATCTACATACGGAAGCTGATCCTCCGATATTCCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCCAGGTTAAATGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATACTGAAGGAATTGTACCTGGCCATGTATCCACAGTGGTGAAAGGAACCCCAGGCTACCTTGACCCAGAGTACTTTTTGACGCATAAGTTGACTGACAAGAGTGATGTTTATAGTTTCGGTGTTGTCCTTCTGGAACTTTTGACTGGGAAGCCACCGATCTCACATGGCAAAAATCTTGTTAGAGAGGTTACTGTTGCATACCAATCCGGTGAAGTATTCTCTGTGGTTGATGAACGCATGGGGCCCTATCCTTCTGAGCACATAGGGAAGTTCTTGGACCTGGCCCTCAGGTGCAGCAAAGAAGAGCCAGATGCACGACCTAAAATGGCAGAAGTGGCTCGGGAGCTTGAAAGTATGTGGACCATGATGCCGGAGTCCAATGCCAGGATACCTGAATATATATCCAGTGATTCTGGAAAAATATTCAGTAGTTCAACACCATCTTCGTCCTCTGTTAGCAAAACTCCTTTCATATCGGGAGACATGTCTGGTAGCGAACTTGTTAGTGGGGTAGATCCAACCATCAGGCCAAGGTAG 2781 0.4358 MYLSKVWQYEAVFSLWFCCWSLLVTAQGSVTDPNEVAALRAIKWRLIDLNGNLSNWNGGDPCTSKWRGVNCFSSPRADNYLHVQELRLLNLNLSGTLAPEIGNLSYMEILDFMWNNIGGSIPKEIGNIKSLRLLLLNGNNLTGPLPEELGYLPNLTRMQIDLNNITGPIPTSFAELNSTKHFHMNNNSLTGPIPREFSRLSSLVHLLLDHNNLSGDLPHELSQMPRIRIIQLDNNDFGGANIPDSYSNITTLLKLSLRNCNLQGPIPDFSRVPHLLYLDLSSNQLNGPIPSNKLSERVTTIDLSNNKLAGNIPPNFSALPNLQLLDFQNNNLLGISGTIDLPPNVTLRLAGNPLCSNNTLVHLCGSASDNDTNHLSLTDSTVNCPPQECLPPYEYSKTSSVKCFCAAPLLIDYRLKSPGFYEFHPFQTKFENFLASNYTLTINQVDIGTPEWDGLRLKMYLKLFPEPIDNISYLTFNESEVQRLYSMFTGWVISDDEFFGPYELLDFPLVGPYRDMLFGPNTSSGMSKGALAGIILGTIAGTVTLSAIVTLLILRARMRDYHALTSSRQLSRISIKIDGVRSFTFEEMTLATNNFSDSSQAGQGGYGKVYRGTLTDGTVVAIKRARAGSLQGRREFLTEIQLLSRCHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSADSKQPLSFDTRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVTVAYQSGEVFSVVDERMGPYPSEHIGKFLDLALRCSKEEPDARPKMAEVARELESMWTMMPESNARIPEYISSDSGKIFSSSTPSSSSVSKTPFISGDMSGSELVSGVDPTIRPR 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1456 926 CDD STKc_IRAK 602 867 - -
Acco10g1456 926 PANTHER RECEPTOR-LIKE PROTEIN 55 52 870 - -
Acco10g1456 926 Gene3D Ribonuclease Inhibitor 32 196 IPR032675 -
Acco10g1456 926 ProSiteProfiles Protein kinase domain profile. 595 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1456 926 MobiDBLite consensus disorder prediction 887 910 - -
Acco10g1456 926 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 671 880 - -
Acco10g1456 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Acco10g1456 926 SMART serkin_6 595 867 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1456 926 Pfam Leucine rich repeat 153 213 IPR001611 GO:0005515
Acco10g1456 926 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Acco10g1456 926 Gene3D Ribonuclease Inhibitor 197 403 IPR032675 -
Acco10g1456 926 SUPERFAMILY Protein kinase-like (PK-like) 580 896 IPR011009 -
Acco10g1456 926 SUPERFAMILY L domain-like 43 364 - -
Acco10g1456 926 Gene3D Phosphorylase Kinase; domain 1 566 670 - -
Acco10g1456 926 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 33 194 - -
Acco10g1456 926 MobiDBLite consensus disorder prediction 887 926 - -
Acco10g1456 926 ProSiteProfiles Leucine-rich repeat profile. 321 342 IPR001611 GO:0005515
Acco10g1456 926 FunFam Leucine-rich repeat protein kinase family protein 559 670 - -
Acco10g1456 926 Gene3D Transferase(Phosphotransferase) domain 1 671 881 - -
Acco10g1456 926 Pfam Protein tyrosine and serine/threonine kinase 600 864 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1456 Acco-ChrAcco10 28310179 28317992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1456 14 878 Receptor kinase-like Gene Family AT5G01950 54.273 0.0 921
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco10g1456 PK_Tyr_Ser-Thr 5.6e-46 CL0016