Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1435 ATGGCTAATTACAGAGACGCTCCTTCTCTTTCTCTCTCTACTGCACACAGGAGTTTCTGGATTTTGGCTTCGTTTGATTTGCAAGGGGGCCGGGTATGGAGTGCATTGAAAGGAAAAAGAAAAGTGGAGCTTGATATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACAAGAAGGAGGAGGAGGAGGGGAGAAGAAATGTCTGAATTCTGAGCTATGGCATGCATGCGCGGGTCCTCTCGTGTCCCTACCAAATGCAGGGACTCGTGTGGTTTACTTCCCACAGGGTCATAGCGAGCAGGTTGCAGCCACAACTAACAGAGAACTTGATGGGCACATACCCAATTACCCGAGCTTGCCGCCCCAGTTAAATTGTCAACTTCATAATGTCACAATGCATGCCGATGTTGAAACAGATGAAGTATATGCTCAAATGACACTGCAGCCATTGACTCCACAAGAGCTGAAGGAAACATTTCTTCCTTTGGAATTGGGCATTCCAAGCAAACAGCCCTCAAATTATTTTTGCAAGACGTTAACGGCAAGTGACACCAGCACACATGGAGGGTTTTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTCCCTCCACTGGATTTCTCACAGCAGCCACCGGCACAAGAACTAATTGCTAGGGACCTCCATGATGTTGAGTGGAAGTTCAGACACATTTTTCGCGGACAGCCAAAACGACACCTTCTTACAACAGGCTGGAGTGTATTTGTTAGTGCCAAGAGACTTGTAGCTGGAGATTCTGTGCTATTTATATGGAATGAAAAGAATCAGCTACTTTTAGGAATACGTCGTGCCATACGGCCCCAAACTGTGATGCCATCATCAGTTCTTTCAACTGATAGTATGCACATTGGACTTCTTGCAGCTGCTGCTCATGCTGCTGCAACTAATAGCTGTTTTACAGTGTTCTATAATCCAAGGGCTAGTCCTTCTGAGTTTGTCATACCACTTTCAAAATATGTCAAGGCTGTGCACCATACACGTGTTTCAGTTGGCATGCGATTCAGGATGCTTTTTGAGACTGAGGAATCAAGTGTACGCAGGTACATGGGAACGATAACTGGCATAAGCGATCTGGATCCTGTTCGTTGGCCAAATTCTCATTGGCGATCTGTCAAGGTTGGTTGGGATGAATCAACAGCAGGAGATAGGCAGCCACGGGTATCATTATGGGAAATTGAGCCCTTGACTACATTCCCAATGTATCCATCACTCTTCCCCCTTAGATTGAAACGACCATGGCATCCTGGCTCTTCATCTTTGCATGATGGAAGAGACGATGCAGGGCTGATGTGGCTGAGAGGTGGACCCGGAGATCAAGGTCTCAGCTCCCTCAATTTTCAAAGCAGTGGTTTGTTGCCATGGATGCAGCAGAGGCTAGATCCAACTTTGCTAGGAAATGACCATAATCCACAATATCAAGCCATGTTGGCAGCTAATTTGCAGAACCTAGGGAGTGGCGACCTCTTGCGTCAGCAAATGATGCATCTGCAACAACCCTTTCACTATCTTCAACAATCAGGAAACCCGAATTCTCTGCAGTTTCAGCAGCAGCATCAAGCAATTCAGCAATCGATGAGTTCCAACATCCTCCAGCCACAAACTCAAGTGTTGGCTGAGAACTTGTCTCAGGCCCTCCTTCAGAAGCCACATAACAATCAAGAAGATCAAGCACCGCAGCCACAGCAGCAGCAACAACAACAGAATAATTACCATGATGCATTTTTTATCCAGGGTGATCAGCTCCCACAGAGGCAACACTCCCATGCTGCTTCACCATCATATTCGAAACCTGATTTCTTTGATTCGAGCATAAAGTTCTCTTCGGTTTCCCCTGGGCAGAACATGCTCGGTTCGCTTGGTCCTGAAGGGAGTAGCAATATTTTCAGCTTACCAAGAAGTAGTCAGTCCGTGCTGACGGAACAATTGACCCAACAATCATGGAGTTCTAAGTATCCGCCCGTGCAGGTGAGTGCTGCCTTTGGCAACTCAATGTCACACGCGCAATATACTGAGAAAGATTCTGCAACGGTGCCATCACATTGTACTTCTGATGCCCACAATCCTACTCTCTTTGGAGTTAATATTGATTCGTCTGGACTTCTGCTCCCCACCACTGTCCCTGGTTTTTCAACGTCCTCGGTTGGTACTGATGCATCAACCATGCCATTAGGGGACTCTGGATTCCAGGCTCCTCTGTATAATTGTGTGCAAGATTCTGCAGAGTTGATTCAGAGTTCAGGGCAAGTTGACCCACAAAACCAAACTCCGACATTTGTCAAGGTCTACAAGTCAGGTTCGGTTGGGCGCTCACTTGATATCTCTCGGTTCAGCAGCTATCATGAGCTGAGGGAGGAGTTGGCCCAGATGTTTGGAATTGAGGGGAAGTTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTTGACAGGGAGAATGATGTCCTTCTCCTTGGAGACGATCCCTGGGAATCATTCGTCAATAATGTTTGGTACATAAAGATACTCTCACCTGAGGATATTATGAAGATGGGCGAGCAATCGGTGGAATCGTCGCTGGGTCCGAACGGGGGACAAAGAATGAACAGCAGCACTGCAGAATCTCAGGACCTTTCTGGCTTTCCATCAATGGGCTCGCTTGAATACTGA 2688 0.4714 MANYRDAPSLSLSTAHRSFWILASFDLQGGRVWSALKGKRKVELDMKLSTSGLGQQGQEGGGGGEKKCLNSELWHACAGPLVSLPNAGTRVVYFPQGHSEQVAATTNRELDGHIPNYPSLPPQLNCQLHNVTMHADVETDEVYAQMTLQPLTPQELKETFLPLELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAIRPQTVMPSSVLSTDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVHHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGSSSLHDGRDDAGLMWLRGGPGDQGLSSLNFQSSGLLPWMQQRLDPTLLGNDHNPQYQAMLAANLQNLGSGDLLRQQMMHLQQPFHYLQQSGNPNSLQFQQQHQAIQQSMSSNILQPQTQVLAENLSQALLQKPHNNQEDQAPQPQQQQQQQNNYHDAFFIQGDQLPQRQHSHAASPSYSKPDFFDSSIKFSSVSPGQNMLGSLGPEGSSNIFSLPRSSQSVLTEQLTQQSWSSKYPPVQVSAAFGNSMSHAQYTEKDSATVPSHCTSDAHNPTLFGVNIDSSGLLLPTTVPGFSTSSVGTDASTMPLGDSGFQAPLYNCVQDSAELIQSSGQVDPQNQTPTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIMKMGEQSVESSLGPNGGQRMNSSTAESQDLSGFPSMGSLEY 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1435 895 Pfam AUX/IAA family 765 855 IPR033389 -
Acco10g1435 895 ProSiteProfiles B3 DNA-binding domain profile. 176 278 IPR003340 GO:0003677
Acco10g1435 895 Pfam Auxin response factor 302 385 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco10g1435 895 MobiDBLite consensus disorder prediction 862 888 - -
Acco10g1435 895 Gene3D - 174 278 IPR015300 -
Acco10g1435 895 SUPERFAMILY DNA-binding pseudobarrel domain 160 305 IPR015300 -
Acco10g1435 895 Pfam B3 DNA binding domain 176 277 IPR003340 GO:0003677
Acco10g1435 895 Gene3D - 765 858 - -
Acco10g1435 895 SUPERFAMILY CAD & PB1 domains 763 843 - -
Acco10g1435 895 Gene3D - 340 412 - -
Acco10g1435 895 FunFam Auxin response factor 764 858 - -
Acco10g1435 895 SMART B3_2 176 278 IPR003340 GO:0003677
Acco10g1435 895 MobiDBLite consensus disorder prediction 861 895 - -
Acco10g1435 895 ProSiteProfiles PB1 domain profile. 769 853 IPR000270 GO:0005515
Acco10g1435 895 CDD B3_DNA 175 276 IPR003340 GO:0003677
Acco10g1435 895 FunFam Auxin response factor 340 412 - -
Acco10g1435 895 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 65 858 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco10g1435 895 FunFam Auxin response factor 174 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1435 Acco-ChrAcco10 28125600 28132943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1435 146 860 B3 DNA Binding Superfamily AT5G37020 69.018 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco10g1435 AUX_IAA 4e-08 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1435 10 28125600 28132943 Acco10g1435 10 28125600 28132943 ECH