Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1419 ATGGCACCTGTTTCACTGCCTCCTGGTTTTAGGTTCCACCCAACGGATGAAGAGCTGGTTGCTTACTATCTCAAAAGAAAGATCAATGGCCACAGGATTGAGTTAGAGATCATCCCCGAAGTTGATCTTTACAAGTGCGAACCCTGGGACTTGCCTGGAAAATCGTTGTTACCGGGAAAAGATTTGGAGTGGTATTTTTTCGGTCCTCGAGATAGGAAGTACCCAAATGGGTCAAGAACAAATAGAGCCACAAAATCGGGATATTGGAAAGCAACAGGAAAAGACAGGAAAGTGAATTCTCAATCTCGTTCAGTGGGCATGAAGAAAACCCTAGTTTACTATCGAGGTCGAGCCCCTCATGGGTGTCGTACCAACTGGATCATGCATGAGTATCGTCTTGACGAAAAAGAATGTGAAGTTGCTTCTGGCATTCAGGATGCTTATGCTCTCTGTCGTGTGTTCAAGAAGACTGCAGTGATAACCACGAAAATGGGAGATCATTACGTGACTAATGGATCAAATCAGATTATGAATACAAGTGATCAGTCATCTAGCATTGAACTATACTCTGAAGGAAGACCAGGAGAAGATTTAGAGAGCTCAGATTATTTGATGCCCCTGGATCATCATAATAGCTCATCACCCTATAGTGGAAATCCCTCTTCAGGACCAAGAGATCAAGGGAAATGGTCACAAACACAGTTCTTTTCTGAAGAAGATCCTTTGTCTCTCCCAAATTCTTCTTCATTATTTTCCAACAATGGCTCCATTCCATACCCTCCATCCAAGGTGGATATTGCACTGGAATGTGCCAGGATGCAGCATAGGTTTTCTCCAATGGAGGACTTGCCTTCTGAACTGAAGATGCAAGCACAATATGGTGGGACCAGGAATGAAACTGATGAGTTATTACATGAGATTCTTTCAGTTGCTCATGCTTCTCAGGAACTTATAAATCAGTCTTCTGATTACTATTCTTCTCATTCATTGGGTACTACTAGTACTGCAGCAAACCAGCATTATTATGCTCCAAATTCTGAACAAGAAGATGGTTTCACTTTCATGGTTGGCAGAGATAGTACTGCTAATGACTATGACTATTATAGTAATGCCTGCTGGGAAGATCCTGTAAACAGTAGGTCCATCGAGATTGGAGATCTGGATGATGATTTCAAAGCAGAGAGGATTGTTGAGAATTTAAGATGGGTTGGCATGTCAAGCAAGGATCTGGAAATTAAGGGCTATATGGAAGATCAGAAAGTTGTTCCAATTGAGGATATTTCAAGTTTCCGAGGAAATAGGGAGGGGAATGAATTGCTGCAAGAGTGTGATAATCAGCAAGAAAATAGCAGCAAGCAGGAACTGAATGACACAGACATAAACGATGACATGTCATTAGGGTTCATCAACGAGGATGGCGCTAATAATGAGAACTTGATAGATGAAGAAGGCGATGATGATGATTCGAGTTCTCCAAGCTTCGAGGTGGTAGAAGAAGTCAAAGTTAGCCACGGAATGTTTGTATCCACAAGACAAGTAGCCGACACATTCTTTCACCAAATAGTTCCTTCACAAACCCTCGAGGTTCACCTCAATCCAGTGATAATGGCACACAATAATTGTCACTCAGTGGAGAACTTAGATACAGTTTCTTTCTTTAGAAACTTTAAGGCCTGTGTGGTGAAGACAATAACAAGTCCCATTGTGTTCATATTTTCACTTCTGCTGATGACTTGTATTTATTATTCATCAGATTCTGATCATCAGGATGTGAAGGATAGAAGTCGGAGTACTGGTGATTGCAATAATAGCATGAAGAGGGTGATGAGGGAATATGAAGAAGATGATGAGAAGCAAAAAGTTTGGTTTGTGGGCATCAAAAGTGGAAAAGGGTTCAGCATGGTGTTGAAGAAGATAGGAATTTTTCTCACAATTTCTTTTGCTCTTTGTACCATGTGGGCTAACCACATCATTGTTCATTAA 1983 0.412 MAPVSLPPGFRFHPTDEELVAYYLKRKINGHRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFGPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRSVGMKKTLVYYRGRAPHGCRTNWIMHEYRLDEKECEVASGIQDAYALCRVFKKTAVITTKMGDHYVTNGSNQIMNTSDQSSSIELYSEGRPGEDLESSDYLMPLDHHNSSSPYSGNPSSGPRDQGKWSQTQFFSEEDPLSLPNSSSLFSNNGSIPYPPSKVDIALECARMQHRFSPMEDLPSELKMQAQYGGTRNETDELLHEILSVAHASQELINQSSDYYSSHSLGTTSTAANQHYYAPNSEQEDGFTFMVGRDSTANDYDYYSNACWEDPVNSRSIEIGDLDDDFKAERIVENLRWVGMSSKDLEIKGYMEDQKVVPIEDISSFRGNREGNELLQECDNQQENSSKQELNDTDINDDMSLGFINEDGANNENLIDEEGDDDDSSSPSFEVVEEVKVSHGMFVSTRQVADTFFHQIVPSQTLEVHLNPVIMAHNNCHSVENLDTVSFFRNFKACVVKTITSPIVFIFSLLLMTCIYYSSDSDHQDVKDRSRSTGDCNNSMKRVMREYEEDDEKQKVWFVGIKSGKGFSMVLKKIGIFLTISFALCTMWANHIIVH 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1419 660 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Acco10g1419 660 MobiDBLite consensus disorder prediction 168 230 - -
Acco10g1419 660 MobiDBLite consensus disorder prediction 168 189 - -
Acco10g1419 660 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Acco10g1419 660 MobiDBLite consensus disorder prediction 476 493 - -
Acco10g1419 660 FunFam Nac domain-containing protein 86 15 159 - -
Acco10g1419 660 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Acco10g1419 660 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 254 - -
Acco10g1419 660 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Acco10g1419 660 MobiDBLite consensus disorder prediction 206 230 - -
Acco10g1419 660 MobiDBLite consensus disorder prediction 471 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1419 Acco-ChrAcco10 27978350 27982094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1419 1 652 NAC Transcription Factor Family AT1G65910 45.495 8.01e-173 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco10g1419 NAM 1.1e-39 No_clan