Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1412 ATGGCTCTGTCGAAGACATCCACAGAGACGGAAGCTTCCGTCCACTCGATGTTCGCGTCCAGGTACGTGAGAGCGCCGCTGCCGAGGTTCAAGATGCCGGAGCATTCAATCCCCAAGGAGGCGGCTTACCAGATCATAAACGACGAGCTCATGCTCGACGGTAATCCCAGGCTCAATCTCGCCTCCTTCGTTACCACCTGGATGGAGCCTGAGTGCGACAAGCTCATCATGTCCGCCATCAACAAGAATTACGTCGACATGGATGAGTATCCTGTCACCACCGACCTCCAGGCACCTTCCTCTTCTTTCTTTCTAATAATTTTTTCCAATCGGTGTGTGAACATGATAGCCCATCTTTTCAATGCACCGCTTCAAGAATCAGAACCTGCGGTGGGTGTTGGCACAGTTGGCTCATCGGAGGCCATCATGTTGGCTGGCTTGGCTTTCAAGAGAAAGTGGCAGAGCAGGAGAAAAGCAGAGGGAAAGCCCATTGACAAACCCAATATTGTCACTGGCGCTAATGTTCAGGTTTGCTGGGAGAAATTTGCGAGGTACTTTGAGGTGGAGCTGAAAGAGGTGAAGCTGACGGAAGATTACTTCGTAATGGATCCTGAAAAGGCAGTGGAAATGGTGGATGAGAACACCATCTGTGTTGCTGCCATCCTCGGTTCCACCCTCAACGGAGAATTCGAAGACGTCAAACGCTTAAATGATCTACTCATTGAGAAGAATAATGAAACTGGATGGGATACATCAATTCATGTGGATGCAGCGAGTGGAGGCTTCATCGCACCATTTTTATATCCAGACCTTGAATGGGACTTTCGGTTGCCACTTGTGAAGAGCATCAACGTTAGTGGACACAAGTATGGACTTGTGTACGCAGGCATCGGTTGGGTCATTTGGAGAAGTAAAGAAGATTTGCCTGACGAGCTCATCTTCCACATTAACTACCTTGGAGCTGATCAACCCACCTTTACCCTCAACTTCTCCAAAGGTTCTAGTCAAGTCATTGCTCAGTACTACCAGCTCATCCGCTTGGGCTATGAGGGATATAGGAATGTGATGGAAAATTGCAGAGACAACATGATAGTGCTGAAAGAGGGATTGGAGAAAATAGGGCGTTTTAACATCATATCAAAAGACGATGGATTGCCATTAGTGGCCTTCACTTTAAAGGATCACACGCACTTCACTGAATTCCAGATCTCACATTTCTTGAAGCGCTATGGCTGGATCGTTCCGGCCTATACTATGCCACCCGACGCTCAGAGCGTCACCGTAATCCGCATCGTCATCAGAGAGGATTTTCCTCGAACATTCGCCGAGCGTCTCGTCATTGATATTCAGAATGTCTTGCACGAGCTCGATTTGCTCTCCGGCCGGCCCGTCGTGAGCACTACCGTCAATGACACAGCGGAGATGGCAGAAAACGGCCATACCGTCGTCAAGAAGAGTGAACACGAGACCGAAAAAGAAATCATTACGGCCTGGAGGAAGTTCGTGTCCGACAGGAAGAAGATGAACATAAAGATGAATGGTGTTTGTTAA 1551 0.4848 MALSKTSTETEASVHSMFASRYVRAPLPRFKMPEHSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSAINKNYVDMDEYPVTTDLQAPSSSFFLIIFSNRCVNMIAHLFNAPLQESEPAVGVGTVGSSEAIMLAGLAFKRKWQSRRKAEGKPIDKPNIVTGANVQVCWEKFARYFEVELKEVKLTEDYFVMDPEKAVEMVDENTICVAAILGSTLNGEFEDVKRLNDLLIEKNNETGWDTSIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGYEGYRNVMENCRDNMIVLKEGLEKIGRFNIISKDDGLPLVAFTLKDHTHFTEFQISHFLKRYGWIVPAYTMPPDAQSVTVIRIVIREDFPRTFAERLVIDIQNVLHELDLLSGRPVVSTTVNDTAEMAENGHTVVKKSEHETEKEIITAWRKFVSDRKKMNIKMNGVC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1412 516 Gene3D - 66 372 IPR015421 GO:0003824
Acco10g1412 516 PANTHER GLUTAMATE DECARBOXYLASE 1 507 IPR010107 GO:0004351|GO:0006536|GO:0030170
Acco10g1412 516 FunFam Glutamate decarboxylase 66 372 - -
Acco10g1412 516 Gene3D - 1 65 - -
Acco10g1412 516 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 393 IPR002129 GO:0016830|GO:0019752|GO:0030170
Acco10g1412 516 NCBIfam glutamate decarboxylase 16 456 IPR010107 GO:0004351|GO:0006536|GO:0030170
Acco10g1412 516 FunFam Glutamate decarboxylase 373 460 - -
Acco10g1412 516 SUPERFAMILY PLP-dependent transferases 14 456 IPR015424 -
Acco10g1412 516 Gene3D - 373 459 - -
Acco10g1412 516 FunFam Glutamate decarboxylase 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1412 Acco-ChrAcco10 27892543 27894635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1412 1 516 Calmodulin-binding Proteins AT5G17330 78.185 0.0 847
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1412 10 27892543 27894635 Acco10g1412 10 27892543 27894635 ECH