Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1405 ATGCCCTTACAAGGGATAGCCATCGAGCCCAGTTCCGCAACATGTTCTCCTCCTGATCTTTCCCTTCACATAAGCCCTCCTCCTCCTCCTTCTTCTTTGTTGGTAAATCAAGCTCATACTGATCTCTCTCTAGCCCCCAATTTCTTCACAGACCAACCTCCTCCTCTTTATTATCATTCTCATCCTCAAAATCACAACACCACCACAGCCTCTCACTTATCCAACCACATGAATCGGCCGCAGTCCGATGTCAGCCTGAGACCCATCAAGGGGATTCCGGTGTATCACAACCACCAGCGCTGCTTCCCTTTCTTGCCTATGGACCATCCCACAGGCAAGGATCTTCATCATCATCAGAAGATGTGGTTACAGCATCCTTCTAACACTTCTTCTTCTTGGGGTTATAATCATAATCATAATAATCATACCATGGGAGGTTTGGATAATCCGATGTGGGTCTTAAACGGGTTGCCGTCTAATTTCAAACCTCATAATCATCAGTTACACTATGGGGTTGGGGTAGGGGCTTCTCATCATCATCATCACAGTGAAGAGGCCAATACATCTTCATCAGGGTTCATGATGAGATCGAGATATATGCCAAAACTACCCTCCAAGAGAAGCATGAGAGCTCCCAGAATGCGTTGGACTACCACCCTTCATGCCAGATTCGTTCACGCTGTTCAACTTCTTGGCGGCCATGAAAGAGCAACTCCAAAGTCAGTTCTGGAGCTGATGGATGTGAAAGATCTCACATTAGCTCATGTTAAAAGCCACTTGCAGATGTATAGAACAGTCAAGACCACTGACAAGCCTGCTGCTTCATCAGGCCAATCAGATGGATCTGGTGAAGATGACATGTCTCCGATGGGTGGCAACGCCGACGGTGGCAGTCTTAGTCATTTTTCCGATCAAAGAGGCCGAGCAGATCGGTCTGTGCAACAAGACATAGACCATCCTTCTTCTAATACTTTATGGAGTAATTCTTCAAGTAGCAGAGAGGCATGGCCACAGAATAACTGTTATGATATGGATGGTCTCAGAAAAACTACCTTCCACTCGCAACCAACGTCAAGATCAGGTCATCAAACTCAGGAATGTAATTCAAGCGAAGCACGACTACTACTGAAGAACAGTTTGTCGCTTGTGAATATAGAATGCAATAAGGATCCAAGTTTGGAGTTTACATTAGGAAGACCAGATTGGAATGGCAAAGGACTTGCCTAA 1227 0.4564 MPLQGIAIEPSSATCSPPDLSLHISPPPPPSSLLVNQAHTDLSLAPNFFTDQPPPLYYHSHPQNHNTTTASHLSNHMNRPQSDVSLRPIKGIPVYHNHQRCFPFLPMDHPTGKDLHHHQKMWLQHPSNTSSSWGYNHNHNNHTMGGLDNPMWVLNGLPSNFKPHNHQLHYGVGVGASHHHHHSEEANTSSSGFMMRSRYMPKLPSKRSMRAPRMRWTTTLHARFVHAVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGEDDMSPMGGNADGGSLSHFSDQRGRADRSVQQDIDHPSSNTLWSNSSSSREAWPQNNCYDMDGLRKTTFHSQPTSRSGHQTQECNSSEARLLLKNSLSLVNIECNKDPSLEFTLGRPDWNGKGLA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1405 408 MobiDBLite consensus disorder prediction 350 367 - -
Acco10g1405 408 FunFam Myb family transcription factor 210 268 - -
Acco10g1405 408 MobiDBLite consensus disorder prediction 316 338 - -
Acco10g1405 408 MobiDBLite consensus disorder prediction 265 283 - -
Acco10g1405 408 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 404 IPR044847 GO:0000976|GO:0006355|GO:0010158
Acco10g1405 408 SUPERFAMILY Homeodomain-like 209 265 IPR009057 -
Acco10g1405 408 MobiDBLite consensus disorder prediction 265 367 - -
Acco10g1405 408 NCBIfam myb-like DNA-binding domain, SHAQKYF class 212 265 IPR006447 GO:0003677
Acco10g1405 408 MobiDBLite consensus disorder prediction 1 29 - -
Acco10g1405 408 Gene3D - 211 268 - -
Acco10g1405 408 Pfam Myb-like DNA-binding domain 213 264 IPR001005 -
Acco10g1405 408 MobiDBLite consensus disorder prediction 175 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1405 Acco-ChrAcco10 27824603 27829307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1405 87 405 G2-like Transcription Factor Family AT5G16560 50.000 3.29e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco10g1405 Myb_DNA-binding 1.7e-05 CL0123