Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1403 ATGAAAAAAGCAAACTTTGATCTTGAAGTGGAGGCCTCCGCGGAAGAAAGTGAAGTTGAAGTCAGCAGCCAGATTGCTTCCAATATATCCACTCAAGAAACTATTGTAGATCCTTGTATTGATCAAAACCTGTCCAACTCTTCCACCCCAAGAAATCCAACAGAGTTAATTGATTTAAATTCAACTCCCGTTTCACTTGATCTGACTCTCAACTTAAACAGTAAACCATTAGCAGTGTCAAGAGATTCTGTGCGACGCTCATTGTCTAGCACTAGTGAGAGTAGCAATGAACCTGCCTCTCAAACTACAGAGGCGACCATGACCAGAATTTTTACATGCTATTACTGTCAACGCAGGTTTGTCAGCTCGCAGGCTCTCGGGGGCCACCAAAACGCACACAAGCGGGAAAGATCAGTGGCAAAGAATGCTGTGAGGATGGGTTTTTTCCCTCAGAGGTATCCAAACACTCTGGAAGCTATCCCTCTTCATGTTCCTCCCAGATCATTGGGCATGAAACCACACTCTTCACAGTACTTTGTCATTTCACCAACAAGTAAGGTTCAGGAGACGAAAAACAATGCAGGATTTGAGGTAGGGTATCATGGTCAGCCAATTTTCTTTGGGAATAATCAATCTGGGCTTGTTTGGCCTGGTAGTTTCCGTCAGATGGCTGACGATCACAAGGATTTTCTGCTGACTGAAAGTTCTGATATGAGTTTTAGGGAGGTGAATCCACCAGTAGACGCCACCCCAGATTTGACATTAAAACTTTGA 774 0.4393 MKKANFDLEVEASAEESEVEVSSQIASNISTQETIVDPCIDQNLSNSSTPRNPTELIDLNSTPVSLDLTLNLNSKPLAVSRDSVRRSLSSTSESSNEPASQTTEATMTRIFTCYYCQRRFVSSQALGGHQNAHKRERSVAKNAVRMGFFPQRYPNTLEAIPLHVPPRSLGMKPHSSQYFVISPTSKVQETKNNAGFEVGYHGQPIFFGNNQSGLVWPGSFRQMADDHKDFLLTESSDMSFREVNPPVDATPDLTLKL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1403 257 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Acco10g1403 257 SUPERFAMILY beta-beta-alpha zinc fingers 108 138 IPR036236 -
Acco10g1403 257 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 16 189 IPR044246 GO:0009788
Acco10g1403 257 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Acco10g1403 257 MobiDBLite consensus disorder prediction 1 23 - -
Acco10g1403 257 Gene3D Classic Zinc Finger 87 147 - -
Acco10g1403 257 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1403 Acco-ChrAcco10 27810370 27811143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1403 61 257 C2H2 Transcription Factor Family AT1G24625 35.681 9.27e-25 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco10g1403 None None None