Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1398 ATGGCTGGGGATAGGGTTGCAGAGGAGGCGGTGAGGGATGAAAGAGAGGAGAAATCGTCTTATTCGTCTTCGAGATCGTCTTCTTCGTCGTCTTCCGATGACCGGGAATACGAAGTTCAGGACCTGAGAGACAGGTTGAAATCGTCGAGAGGAAGCCGATTCCAATTGATCGAGGAGGAGTTGAAGGAACTCAGACAAAGGAAACTGAGTCGCTACGTCCTTGACGGGATCCGAGGCTTCTCCAAAGATTTCATCATCCATCCAGAGAAGAACAGGTGTTATCGGGTATGGACAAAATTCATATTGTTGTGGGCAATATACTCATCCTTCTTCACCCCAATGGAGTTTGGATTCTTTCGTGGGCTAGACAAGGATCTCTTTATATTGGATATAATTGGCCAAGTTGCATTTCTAGTAGACATCGTTGTGCAGTTCTTGCTTGCTTATAGGGACAGTCAGACCTATCGTATGATTTACAAGCCATCCTCTATAGCTCTACGGTATCTAAAATCTAGCTTTATCTTTGATCTTCTTGGATGTATGCCTTGGGACATGATCTATAAGGCTAGTGGAAGAAGAGAGGGTGTAAGGTACCTTCTCTGGATAAGATTATATCGAGTGCGGAAAGTGACGGAATTTTTTCAGGGGATGGAGAAGGACATACGTATCAATTACATGTTTACTAGGATTGTGAAACTTCTAGTGGTTGAACTCTACTGCACGCATACAGCAGCCTGCATCTTCTATTACTTGGCTACCACACTACCTCCATCTCAAGAAGGTTACACTTGGATCGGAAGTTTGAAGATGGGCGACTACAGTTATATGAATTTCAGAGAGATTGATCTTTGGAAGCGTTATACAACATCTTTGTATTTCGCTATTGTTACCATGGCCACGGTTGGCTATGGAGACATACATGCAATAAATATGAGGGAGATGATATTTGTAATGGTATATACTTCATTTGATATGGTTCTTGGTGCTTATTTAATTGGTAACATGACAGCTTTAATAGTCAAAGGATCAAAAACAGAAAAGTTTAGGGATAGAATGACGGATCTTTTGAAATATATGAATAGAAACAGACTCGGAAGGGACATCCGTGAGCAATTAAAAAGCCATATGCTCTTACAGTATGAAAGTAGCTACACTGAGCCAGCTGCCATTCAAGACCTCCCTATCTCAGTTCGCTCTAAGATATCCCAAGAGTTATATTTGCCATACATCGAGAAGGTCCCTCTCTTTAAGGGTTGTTCTTTAGAATTTATCAATCAAATCGTTATAAGGCTCCATGAGGAATTCTTTCTCCCGGGGGAAATAATATTGGAACAAGGAAATGTTGTAGATCAACTATACTTTGTCTGTCATGGTGTGCTGGAGGAAGTAGGCCCCTGTGAAAATGGACTTGAAGAGACTGTTTCACTTTTAGAGCCGAACAATTCGTTTGGGCATATATCTATTTTATGTAACATTCCTCAACCATATACTGTTCGGGTGTGTGAATTGTGTAGGCTTCTGCGGCTTGATAAACAATCATTTACAGATATCCTTGATATATACTTTTATGATGGGAGGAAAGTACTAAACAACCTTCTCGAGGGAAAAGACTCTATTCGAGGTAAACAATTAGAGTCAGATATCACATCCCATATTGGAAAGCAAGAAGCTGAACTTGCTTTGAAGGTCAATAATGCAGCTTTTAATGGGGATCTAAATCATCTCAAAGGATTGATTCGAGCTGGAGCTGATTCAAACAAGACAGATTATGATGGACGGTCCCCGTTGCATCTTGCAGCATCTAGAGGATATGAAGAGATCACCGTTTTCCTTATCCAAGAAGGTGTAGAAATCGATAAGAGAGATAACTTTGGGAACACTCCCTTACTTGAAGCTGTGAAGAATGGACATGATCGAGTTGCTTCTTTACTTGTTGCACAAGGGGCTTCTATGGACATAGAGGATGCCGGTAGTGTTCTGTGTAATGCCATAGCAAGAGGAGATTCAGATTATCTTAAAAGGCTATTAGCTAATGGTATGGATCCTAACACGAAAGACTATGATTACCGAAGCCCTCTTCATGTGGCTGCAGCTGAGGGTTTATTCTTAATGGCAAAGTTGTTGGTAGAAGCTGGAGCTAGCGTTTTTATCCAAGACAGATGGGGAAATACCCCACTTGATGAAGCCAGGATGTGTGGAAATAACAATCTAATCAAGCTATTGGAAGATGCAAAGTCTGCTCAGTTGTCAAAATTCCCTCATCTCTCCTCAGAACTTACAGATAAATTTCATCCTAAGAAATGTACAGTCTTTCCTTTCCACCCATGGGATCCAAAAGAACATAGAAGACATGGGATTGTACTATGGGTTCCACACACCATTGAAGAGCTTATCAAAACAGCAGCAGAGCAGCTAGGTGTTTCTAGTGATTGCTCTATTATTCTATCAGATGATGCTGGTAAAATCGCTGATGCCACCTTGATTATGGATGGTCAAAAGCTGTATCTAGTCCATGAAACACATTAA 2526 0.4105 MAGDRVAEEAVRDEREEKSSYSSSRSSSSSSSDDREYEVQDLRDRLKSSRGSRFQLIEEELKELRQRKLSRYVLDGIRGFSKDFIIHPEKNRCYRVWTKFILLWAIYSSFFTPMEFGFFRGLDKDLFILDIIGQVAFLVDIVVQFLLAYRDSQTYRMIYKPSSIALRYLKSSFIFDLLGCMPWDMIYKASGRREGVRYLLWIRLYRVRKVTEFFQGMEKDIRINYMFTRIVKLLVVELYCTHTAACIFYYLATTLPPSQEGYTWIGSLKMGDYSYMNFREIDLWKRYTTSLYFAIVTMATVGYGDIHAINMREMIFVMVYTSFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLLKYMNRNRLGRDIREQLKSHMLLQYESSYTEPAAIQDLPISVRSKISQELYLPYIEKVPLFKGCSLEFINQIVIRLHEEFFLPGEIILEQGNVVDQLYFVCHGVLEEVGPCENGLEETVSLLEPNNSFGHISILCNIPQPYTVRVCELCRLLRLDKQSFTDILDIYFYDGRKVLNNLLEGKDSIRGKQLESDITSHIGKQEAELALKVNNAAFNGDLNHLKGLIRAGADSNKTDYDGRSPLHLAASRGYEEITVFLIQEGVEIDKRDNFGNTPLLEAVKNGHDRVASLLVAQGASMDIEDAGSVLCNAIARGDSDYLKRLLANGMDPNTKDYDYRSPLHVAAAEGLFLMAKLLVEAGASVFIQDRWGNTPLDEARMCGNNNLIKLLEDAKSAQLSKFPHLSSELTDKFHPKKCTVFPFHPWDPKEHRRHGIVLWVPHTIEELIKTAAEQLGVSSDCSIILSDDAGKIADATLIMDGQKLYLVHETH 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1398 841 SUPERFAMILY Ankyrin repeat 565 743 IPR036770 -
Acco10g1398 841 Pfam KHA, dimerisation domain of potassium ion channel 766 836 IPR021789 -
Acco10g1398 841 Gene3D - 96 341 - -
Acco10g1398 841 ProSiteProfiles Ankyrin repeat profile. 688 720 IPR002110 GO:0005515
Acco10g1398 841 Pfam Ion transport protein 95 340 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco10g1398 841 FunFam Potassium channel SKOR 95 340 - -
Acco10g1398 841 Pfam Cyclic nucleotide-binding domain 435 519 IPR000595 -
Acco10g1398 841 ProSiteProfiles cAMP/cGMP binding motif profile. 415 535 IPR000595 -
Acco10g1398 841 CDD CAP_ED 415 529 IPR000595 -
Acco10g1398 841 ProSiteProfiles Ankyrin repeat region circular profile. 624 655 - -
Acco10g1398 841 MobiDBLite consensus disorder prediction 1 44 - -
Acco10g1398 841 Gene3D - 657 751 IPR036770 -
Acco10g1398 841 ProSiteProfiles Ankyrin repeat profile. 624 656 IPR002110 GO:0005515
Acco10g1398 841 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Acco10g1398 841 PRINTS Ankyrin repeat signature 592 607 IPR002110 GO:0005515
Acco10g1398 841 PRINTS Ankyrin repeat signature 704 718 IPR002110 GO:0005515
Acco10g1398 841 SMART cnmp_10 415 533 IPR000595 -
Acco10g1398 841 PRINTS EAG/ELK/ERG potassium channel family signature 130 140 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g1398 841 PRINTS EAG/ELK/ERG potassium channel family signature 331 340 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g1398 841 PRINTS EAG/ELK/ERG potassium channel family signature 287 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g1398 841 PRINTS EAG/ELK/ERG potassium channel family signature 239 249 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco10g1398 841 SMART ANK_2a 721 751 IPR002110 GO:0005515
Acco10g1398 841 SMART ANK_2a 655 684 IPR002110 GO:0005515
Acco10g1398 841 SMART ANK_2a 688 717 IPR002110 GO:0005515
Acco10g1398 841 SMART ANK_2a 624 653 IPR002110 GO:0005515
Acco10g1398 841 SMART ANK_2a 591 620 IPR002110 GO:0005515
Acco10g1398 841 SUPERFAMILY cAMP-binding domain-like 343 532 IPR018490 -
Acco10g1398 841 ProSiteProfiles KHA domain profile. 767 841 IPR021789 -
Acco10g1398 841 Gene3D Jelly Rolls 385 552 IPR014710 -
Acco10g1398 841 SUPERFAMILY Voltage-gated potassium channels 91 340 - -
Acco10g1398 841 MobiDBLite consensus disorder prediction 1 21 - -
Acco10g1398 841 PANTHER POTASSIUM CHANNEL AKT1 62 838 IPR045319 GO:0005249|GO:0006813
Acco10g1398 841 ProSiteProfiles Ankyrin repeat region circular profile. 688 720 - -
Acco10g1398 841 FunFam Potassium channel KAT2 403 540 - -
Acco10g1398 841 Pfam Ankyrin repeats (3 copies) 661 742 IPR002110 GO:0005515
Acco10g1398 841 Pfam Ankyrin repeats (3 copies) 565 655 IPR002110 GO:0005515
Acco10g1398 841 ProSiteProfiles Ankyrin repeat region circular profile. 591 623 - -
Acco10g1398 841 Gene3D - 553 656 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1398 Acco-ChrAcco10 27759488 27767057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1398 634 741 Ion Channels AT5G37500 32.331 9.78e-09 57.0