Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1390 ATGTGTGATGATTCAGAGGCGATGAAATTCAAAGGAATTACGAGGTTTTCGAAGTTAACGCCTGCGGCTTTCGGATTGGGAATCTCAATCACCCACCTTGAGATGGTGAAGGAGACCGAATACTATGACGTGCTGGGAGTCAGTCCCACGGCAACTGAGGCTGAGATTAAAAAAGCTTATTACATAAAGGCACGACAAGTACATCCAGATAAAAACCCAAATGACCCCAACGCAGCACAAAAATTTCAGGTTTTGGGTGAGGCTTACCAAGTTTTGAGTGACCCAAATCAAAGACAAGCTTATGATACCCATGGAAAATCTGGAATCTCAACTGATGCCATTATTGATCCAGCAGCAATCTTTGCCATGCTTTTTGGCAGTGAGCTTTTTGAGGAGTACATAGGCCAATTAGCCATGGCATCAATGGCGTCAATGGATATCTTTAGTGAAGGGGAACAATATGATGCTAAAAAGTTGCAAGAGAAAATGAGGGTTGTTCAGAAAGAGAGAGAAGAAAAGCTTGCAGAGATACTAAAAAATAGCCTGAACCAATATGTCCAAGGAAACAAAATGGAATTTACCAATCATGCAAAAGATGAAGTGTCACGACTATCCAATGCAGCTTATGGGGTTGATATGTTGAATACCATTGGCTACATATATGCAAGGCAGGCAGCTAAAGAGCTAGGGAAGAAAGCAATTTATTTAGGTGTGCCTTTCATTGCTGAGTGGTTTAGAAACAAAGGACACTTCATCAAGTCCCAGGTTACAGCAGCTACAGGGGCAATTGCTCTGATCCAGCTGCAGGAGGATTTGAAGAAACAGCTAAGTGCAGAAGGGAACTACACTGAAGCAGAGCTTGAAGAATACATGCAATCCCATAAGAAATTAATGATTGACTCATTGTGGAAGCTTAATGTTGCTGACATTGAGGCTACTCTATCCCGTGTCTGTCAAATGGTTCTCCAAGACAACAGTGTCAAAAAAGAAGAACTCCGTGCACGAGCTAAGGGGTTGAAAACTCTTGGTAAAATCTTTCAGGGAGTTAAGTCTACCGATGGAAATGAGGGTGAAAATGCACATAATAAACCAGGAGTACATAAATTGGATGGTAGGGAACCCAGCAATGACGCTTCTTCTCCTGGTACATCTCAAGAAAGTTCAAATCCTGGTTTTTCATCACAAACTGTCCCTGTGCCTCAGAGTCCCTATGTGGAGACCCCTCAATTTGCAGGCTCTTCCATGGACTATAACTTCTTCCCTAGGCCAACAGCACCCCCTGGTGCCCAGAGACCAATTAACAGGGATTGA 1311 0.4294 MCDDSEAMKFKGITRFSKLTPAAFGLGISITHLEMVKETEYYDVLGVSPTATEAEIKKAYYIKARQVHPDKNPNDPNAAQKFQVLGEAYQVLSDPNQRQAYDTHGKSGISTDAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFSEGEQYDAKKLQEKMRVVQKEREEKLAEILKNSLNQYVQGNKMEFTNHAKDEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDLKKQLSAEGNYTEAELEEYMQSHKKLMIDSLWKLNVADIEATLSRVCQMVLQDNSVKKEELRARAKGLKTLGKIFQGVKSTDGNEGENAHNKPGVHKLDGREPSNDASSPGTSQESSNPGFSSQTVPVPQSPYVETPQFAGSSMDYNFFPRPTAPPGAQRPINRD 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1390 436 Pfam DnaJ domain 40 102 IPR001623 -
Acco10g1390 436 FunFam Chaperone protein dnaJ 10 35 117 - -
Acco10g1390 436 Pfam X-domain of DnaJ-containing 167 360 IPR026894 -
Acco10g1390 436 Coils Coil 156 176 - -
Acco10g1390 436 SUPERFAMILY Chaperone J-domain 34 135 IPR036869 -
Acco10g1390 436 MobiDBLite consensus disorder prediction 376 414 - -
Acco10g1390 436 CDD DnaJ 40 94 IPR001623 -
Acco10g1390 436 MobiDBLite consensus disorder prediction 356 374 - -
Acco10g1390 436 PRINTS DnaJ domain signature 42 60 IPR001623 -
Acco10g1390 436 PRINTS DnaJ domain signature 77 97 IPR001623 -
Acco10g1390 436 PRINTS DnaJ domain signature 97 116 IPR001623 -
Acco10g1390 436 PRINTS DnaJ domain signature 60 75 IPR001623 -
Acco10g1390 436 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 35 372 - -
Acco10g1390 436 ProSiteProfiles dnaJ domain profile. 40 105 IPR001623 -
Acco10g1390 436 ProSitePatterns Nt-dnaJ domain signature. 82 101 IPR018253 -
Acco10g1390 436 SMART dnaj_3 39 97 IPR001623 -
Acco10g1390 436 MobiDBLite consensus disorder prediction 349 436 - -
Acco10g1390 436 Gene3D DnaJ domain 31 117 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1390 Acco-ChrAcco10 27666559 27673997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1390 41 104 C2H2 Transcription Factor Family AT1G74250 42.029 8.58e-09 55.8