Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1379 ATGGCCATATCCCCTACTCCTAGTCTCTTTCTTCAACCTCGAGTCTTGACCCAAGCCTCATCTCTCTCACTCCTCTCTGTTTCCCTCACCTCTCCACCTCCAATCGAACACTCAAGTGAGCAACCCAATAAACTGATATTGGTATCTAATCTTGTTCAGGTGAGCCCGATAGGTAACTTTGAGAAGGGCGATACGGTTCCTCCATGGTTGAAGCCAATGCTTAGAGCAGATTACTTCGTTACCTGCTCAATCCATGGCGATTCGAATAAGAGCGAGTGCAATATGTTCTGTTTGGAGTGTATGGAAAACGCCCTCTGCTCATATTGCCTGATTGATCACAAAGATCACCGTGTCGTGCAGATAAGGAGGTCCTCATACCATAACGTGGTGAGAGTGAACGAGATTCAGAAGTATATCGACATTTCCTGCGTCCAAACTTACATTATCAACAGCGCCAAGATCGTATTTCTGAATGAGAGGCCACAGCCACGTCCTGGAAAGGGGGTAACTAATACTTGCGAGATTTGTGGCAGAAGCCTCCTTGATTCTTTCAGATTTTGTTCCTTGGGTTGTAAGCTCGGAGCAATGAAGCAGGGTCGCTCAGAACTCACATTTGCGTTGAGAGACAAGAACAACAAGGACATACTAGAGTCTGATGAATCCTCAACTCCTAGAAAAATTCGAAGAACTCATGCTTTCAGCCGCTTGATCGTGGATGATCCAACCATTTTTTACAGCCATGGCAAGGAGAGGTCCTCGGCTTCTGAAGAAGACGAAGGTAACAATGGTAGCATTTCTCCAGCCACACCTCCGATTGACAACCACCATAATGCCAGGAGAAGAAAAGGCATACCCCACAGGGCCCCATTTTAA 873 0.4639 MAISPTPSLFLQPRVLTQASSLSLLSVSLTSPPPIEHSSEQPNKLILVSNLVQVSPIGNFEKGDTVPPWLKPMLRADYFVTCSIHGDSNKSECNMFCLECMENALCSYCLIDHKDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICGRSLLDSFRFCSLGCKLGAMKQGRSELTFALRDKNNKDILESDESSTPRKIRRTHAFSRLIVDDPTIFYSHGKERSSASEEDEGNNGSISPATPPIDNHHNARRRKGIPHRAPF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1379 290 MobiDBLite consensus disorder prediction 248 290 - -
Acco10g1379 290 SUPERFAMILY B-box zinc-binding domain 79 130 - -
Acco10g1379 290 CDD Bbox2 82 121 - -
Acco10g1379 290 Pfam PLATZ transcription factor 122 193 IPR006734 -
Acco10g1379 290 SMART bboxneu5 77 121 IPR000315 GO:0008270
Acco10g1379 290 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 64 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1379 Acco-ChrAcco10 27560244 27561636 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Acco10g1379 PLATZ 2.9e-29 No_clan