Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1362 ATGAATTTGATCTGGGCTGTTTCTTGTTGCGTCCTCGTGCTTTTCTCAGTACCTCCATTTGTGATAAGTGGTAATTCGTCGAGACCGGCCGTCGTGCACATCGGCGCTCTCTTCACCTTTGATTCTACCATTGGGAGAGTCGCTAAAATCGCGTTGGACGAAGCGGTGAAGGATGTCAACGCCAATGCTAGCGTGCTCCGTGGAACTAAACTTGTTCTCACCCAGCAAAATTCCAATTGCAGTGGTTTCTTGGGCATGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGGTGGCAATCATAGGCCCGCAATCTTCCGTTGTTGCTCACATAATATCTCATGTGGCAAATGAACTTCAAGTCCCTCTGTTGTCATTTGCAGCGACGGACCCAACTCTAACCAACCTACAGTTCCCTTTTTTTGTGAGAACAACGATGAGTGATTTGTACCAAATGGCTGCAGTTGCTGAAATTGTTGACTATTATGGTTGGAAGGATGTCATTGCTATTTTTATAGATGATGATTTCGGACGAAATGGTGTGTCGGCCTTGGATGATCAATTATCAGCTAGGCGCTGTAGAATCTCTTATAAGGCAGGAATCAGATCAGGAACAGGAGTTGACCGGAGTGAAATCACGGATTTGCTGGTGAAGGTGGCTCTACTGCAATCTCGGGTCATTGTTCTCCATGTAAATCCTGATTCAGGATTTATGGTTTTCAATGTTGCGCAGTATCTTGGGATGACAGGGAATGGCTACGTCTGGATAGCCACAGATTGGCTCTCCTCTGTTGTGGATTCTACTTCTCTACCTTCAGATACGATGAGTGTCCTTCAGGGCGTTCTTGTTTTACGCCAACATACTCCTGATTCAGATAGAAAAAAAGCATTTCTGTCTAGGTGGAACAAGTTAACTGCAGGCTCTGTGGGGTTACATTCTTATGGCCTTCATACATATGACACTGTTTGGCTGCTTGCACATGCTATTGATGCGTTCTTCAACCAGGGTGGGATTATATCATTTTCTAACGACTCTAGGATACATGATGCTGACAAAGGTAGTCTTAACCTTGAGGCAATGAGCATTTTTGACAACGGAACGCTTCTGTTGAACAACATATTGCAGGGCAACTTTGTTGGTTTAACAGGTCCCGTAAAATTTGAGCCTGACAGATCTCGTGTTCGTCCTGCATATGACATTATCAATGTGGTGGGAACTGGGATTCGTCAGATTGGTTACTGGTCCAACTATTCTGGTCTTTCCATTGTACCTCCTGAGACATTGTATGCTAAGCCTCCCAATCGCTCCATTGCAAACCAACAACTTCATTCTGTAATATGGCCTGGGGAAACACTATCAAAGCCCCGTGGATGGGTTTTTCCAAATAATGGAAAAAAATTGAGAATTGGTGTGCCTATCCGATTCAGTTACCGTCAATTTGTATCACCCATTCAAGGAACTGATTTATTTAAAGGTTACTGCATTGATGTATTCACGGCGGCTGTAAACTTGTTACCGTATGCTGTTCCATATAGCTTTGTTCCATTTGGAGATGGCCGTGAGAACCCAAACTACGATGAACTTGTCAGGTTGATCACCACAGGGTACTTTGATGGGGCTGTTGGCGACATTGCCATTGTCACAAACCGGACAAAGGTTGTAGATTTTACACAGCCATATGCTGAATCTGGACTTCTTGTGGTTGCGCCTTTTAAGAAAACAAACTCTGGTGGGTGGTCATTTCTGCGGCCATTTACTCCTTTAATGTGGATTGTCACTGCTTGCTTCTTCTTTTTCATTGGGATAGTTGTATGGATTCTGGAGCACAGAATAAATGACGAGTTCAGGGGTCCACCCAGACAGCAAATTATAACCATTTTATGGTTTAGCTTGTCAACTCTATTCTTTGCCCACAGAGAGAATACTATGAGTACTCTTGGTCGCATGGTGGTACTCATATGGCTGTTTGTGGTTTTGATAATCAATTCCAGCTACACAGCAAGTTTGACATCAATCCTCACAGTGCAGCAACTCTCTTCTAATATCAATGGAATAGACAGCTTAAAAGCTGGTAATGAACCTGTAGGGTATCAAGTGGGTTCATTCGCAGAACATTATTTGGCTGACGAAATTGGAATATCCAAATCCAGGCTTGTTGCCCTTGGATCTCCTGAAGAATATGCCACGGCTCTCCAGCTTGGTCCTGGCAATGGAGGTGTCGCTGCTATTGTTGACGAACGACCCTATGTTGAAATTTTTTTGTCAACCCATTGCAGCTTCAGGATAGTAGGTCCGGAGTTCACCAGAAGCGGCTGGGGATTTGCATTCCCACGGGACTCTCCTCTGGCCATTGACTTGTCCACTGCAATTCTACAGCTTTCTGAAAATGGTGAACTGCAGCGGATTTATGATAAGTGGCTCGTAGGAAGATCCTGTGGTGCGGATGATACTGAAATAGATTCAGATCGGCTTCAGTTTAAAAGCTTCTGGGGTCTCTTTCTTTTATGTGGGATTGTTTGCATTGTTGCTCTTGCTATCTATTTTTGGCAGATTATGATGCAGTTCTTCCATTCTGATCCTGCTCAACTAGCTTCTTCCGATGGAAGCCCATCTGGACATCTTCGAAGATTTATTTCGCTGATTGACAAGAAGAAAGAACAGTCCAATAACAGCAGTAGAAAGAGGGTTGAAGCCCAAAGATCATTAGAAGAAGATGGATTGGGGAGGCAGCTAAAGAGGTTACAAACAGAAACAAGTCAAACAACTGCTGATTTCAGTTTTCGATTGCAAAATGATCAGGTATAA 2805 0.4381 MNLIWAVSCCVLVLFSVPPFVISGNSSRPAVVHIGALFTFDSTIGRVAKIALDEAVKDVNANASVLRGTKLVLTQQNSNCSGFLGMVQALRFMETDVVAIIGPQSSVVAHIISHVANELQVPLLSFAATDPTLTNLQFPFFVRTTMSDLYQMAAVAEIVDYYGWKDVIAIFIDDDFGRNGVSALDDQLSARRCRISYKAGIRSGTGVDRSEITDLLVKVALLQSRVIVLHVNPDSGFMVFNVAQYLGMTGNGYVWIATDWLSSVVDSTSLPSDTMSVLQGVLVLRQHTPDSDRKKAFLSRWNKLTAGSVGLHSYGLHTYDTVWLLAHAIDAFFNQGGIISFSNDSRIHDADKGSLNLEAMSIFDNGTLLLNNILQGNFVGLTGPVKFEPDRSRVRPAYDIINVVGTGIRQIGYWSNYSGLSIVPPETLYAKPPNRSIANQQLHSVIWPGETLSKPRGWVFPNNGKKLRIGVPIRFSYRQFVSPIQGTDLFKGYCIDVFTAAVNLLPYAVPYSFVPFGDGRENPNYDELVRLITTGYFDGAVGDIAIVTNRTKVVDFTQPYAESGLLVVAPFKKTNSGGWSFLRPFTPLMWIVTACFFFFIGIVVWILEHRINDEFRGPPRQQIITILWFSLSTLFFAHRENTMSTLGRMVVLIWLFVVLIINSSYTASLTSILTVQQLSSNINGIDSLKAGNEPVGYQVGSFAEHYLADEIGISKSRLVALGSPEEYATALQLGPGNGGVAAIVDERPYVEIFLSTHCSFRIVGPEFTRSGWGFAFPRDSPLAIDLSTAILQLSENGELQRIYDKWLVGRSCGADDTEIDSDRLQFKSFWGLFLLCGIVCIVALAIYFWQIMMQFFHSDPAQLASSDGSPSGHLRRFISLIDKKKEQSNNSSRKRVEAQRSLEEDGLGRQLKRLQTETSQTTADFSFRLQNDQV 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1362 934 SMART GluR_14 468 809 IPR001320 GO:0015276|GO:0016020
Acco10g1362 934 Gene3D - 462 576 - -
Acco10g1362 934 Gene3D - 577 708 - -
Acco10g1362 934 Gene3D - 50 395 - -
Acco10g1362 934 CDD PBP1_GABAb_receptor_plant 33 424 IPR044440 -
Acco10g1362 934 MobiDBLite consensus disorder prediction 885 904 - -
Acco10g1362 934 Pfam Ligand-gated ion channel 808 839 IPR001320 GO:0015276|GO:0016020
Acco10g1362 934 Pfam Receptor family ligand binding region 50 405 IPR001828 -
Acco10g1362 934 PRINTS Metabotropic glutamate GPCR signature 100 126 IPR000337 GO:0004930|GO:0007186|GO:0016020
Acco10g1362 934 PRINTS Metabotropic glutamate GPCR signature 151 167 IPR000337 GO:0004930|GO:0007186|GO:0016020
Acco10g1362 934 PRINTS Metabotropic glutamate GPCR signature 167 184 IPR000337 GO:0004930|GO:0007186|GO:0016020
Acco10g1362 934 PRINTS Metabotropic glutamate GPCR signature 132 151 IPR000337 GO:0004930|GO:0007186|GO:0016020
Acco10g1362 934 SUPERFAMILY Periplasmic binding protein-like II 444 807 - -
Acco10g1362 934 FunFam Glutamate receptor 704 811 - -
Acco10g1362 934 FunFam Glutamate receptor 462 577 - -
Acco10g1362 934 FunFam Glutamate receptor 578 708 - -
Acco10g1362 934 SUPERFAMILY Periplasmic binding protein-like I 26 458 IPR028082 -
Acco10g1362 934 PIRSF IGluLR_plant 2 933 IPR017103 -
Acco10g1362 934 Gene3D - 147 420 - -
Acco10g1362 934 Gene3D - 740 772 - -
Acco10g1362 934 FunFam Glutamate receptor 147 306 - -
Acco10g1362 934 CDD GluR_Plant 465 807 - -
Acco10g1362 934 Gene3D - 773 806 - -
Acco10g1362 934 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 33 888 IPR015683 -
Acco10g1362 934 Pfam Bacterial extracellular solute-binding proteins, family 3 490 807 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1362 Acco-ChrAcco10 27430426 27434308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1362 20 898 Ion Channels AT1G42540 64.469 0.0 1231