Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1336 ATGATTACAGTGGCAGGGGCTGTTATTTGTCCCAACGTCGCCTTCGGCTATGTTTTTGACGAAGAAACAAGCTCTCGAAGTCCACCCCTTGATATGCAAGTTCGTGCTCTGTTGTGGATCTTCGTCGGAGAAAATGTCCCTCTGGTAAAGCCGCCTGGCCGTTTGTGCTCTGCATTCTTCACGAGGAACGCCAATTCCAGAGGGTCTAAACACATCACATGTTTCTCCGATTGGAGATCGGAGATTCCAATATTTTTTGATCGAGCTAACGGTTCAATGATGGGAGATAAATCGGAAAACGTGGTCTACCTACATGGGGACCTGGATTTAAAAATTCTTGAGGCTCGATTTTTGCCGAACATGGATTTGTTATCGGAGCGTGTCAGTCAATTCTTTTCCCTCTTCAACTCCTGCACAACCTCAGTTTCCGGTACACCGAGACGCCATCGTCACAGAAAAATCATTACCAGCGATCCTTACGTAAAAGTTTGCCTCGCCAAAGCTACGGTGGCTCGCACTCGGGTCATCTCCAACTCGCAGGATCCGACGTGGAATGAACATTTCAAAATCCCTCTCGCTCATCCCGTCTCGCAGGTCGAGTTCTACGTTAAGGACAATGACATATTCGGCGCTGATCTCATCGGAGTTGCAACCGTCTCCGCCGAGCGAATCTTATCTGGTGAATTCATCAGCGATTGGTTCCCCGTTCTTGGTTCTAATGGTAAACCACCCAAACCTGATTGCGCCATACGTCTCGAGATGAAATTCACGAAATGTGAGGATAGTCCGCTGTACACTTACGGAATTTCTTCCAATCCGGACCGTTTCAAAGTGCGGGATTCTTATTTTCCGGTACGTCATGGGGGATCGGTGACGTTATATCAGGACGCACACGTTCCAGAGTCGATGGTGCCGAAAATTGAATTGGAGAATGGCGTTTTCTTCCAGCAAGGCAGATGTTGGGAAGATATATGTCATGCAGTTTTGGAAGCGCACCATTTGGTTTACATTGTAGGCTGGTCGATCTACCATAAGGTGAAGCTGGTGAGGGAGCCGACGAAGCCCTTACCTAATGGTGGCGATTTAAGTCTGGGTGATTTGCTTAAGTACAAGTCAGGAGAAGGTGCGCGAGTTTTATTATTGGTTTGGGATGATAAGACTTCACACAACAAATTTTTCATTAAAACGGATGGAGTAATGCGTACTCACGATGAAGAGACCCGAAAGTTTTTCAAACACTCTTCGGTTTTCTGTGTGCTGTCACCTCGATATGCCAGCAGTAAGCTTAGCTTTATGAAACAGCAGGTTGTCGGAACCCTCTTTACACATCATCAGAAATGTGTGATTGTGGATACTCAAGCAACAGGCAATAACCGCAAGATAACTGCATTTATAGGCGGTCTAGACCTGTGTGATGGGCGGTATGATACACCTCAGCATCGACTTTTCCAAGATATTGACACTGTTTATAAGGATGATTATCACAACCCTACAGTTCCTGTCGGAATGAAGGGTCCAAGGCAACCATGGCATGATTTACATTGCAAAATCGAGGGGCCTGCCGCATATGATATCCTTACTAATTTTGAGCAACGCTGGAGAAAAGCCACCAAGTGGCGCGAGTTGGGTCAAAAATTTAAAAAAGTATCTCGTTGGCACGATGATTCTTTGTTAAAGCTAGAACGCATCTCTTGGATTCTTAGTCCTTCGGCATTTATTTCAAATGATGATCCAGAACTATGGGTTTCAAAGGAAGAAGAACCAGAAAACTGGCATGTTCAGATTTTTCGATCAATAGATTCAGGCTCATTGACAGGATTCCCTAAGGATGTGTATGAAGCTGAGAATCAGAACCTTGTTTGTGCAAAAGATTTGGTCATTGACATGAGTATACAAACAGCATACATACAAGCTATCAGATCTGCTCAACATTTCATTTACATTGAGAATCAGTATTTTGTTGGATCGTCTTTCGCATGGCCTTCTAACAAAGAAGCAGGTGCTGACAATTTAATTCCTATGGAGTTGGCATTGAAGATTGTCAGCAAAATTAGAGCCAATGAGAGATTTGCTGTTTATGTTGTTATACCAATGTGGCCTGAGGGCGTCCCTTCTTCTGCAGCAGTTCAAGAGATTCTTTTTTGGCAGAGACAAACTATGCAAATGATGTATGAAATCATAGTACAAGAGTTGAAATCCATGCGCATTCACGACAGACGCCCAAGAGATTACCTCAATTTCTACTGTCTGGGAAATCGGGTTAACTGGCCGGCTGAAGTTTTAGGTTCAAATAATTCTGCTCCAGATAACTGTGATACGGTTTCAGCTTCACAAAAGTTTCAACGCTTTATGATTTACGTGCACGCCAAGGGTATGATTGTGGATGATGAGTATGTGTTACTTGGCTCTGCCAATATCAATCAACGATCGTTGGCCGGTTCAAGAGATACAGAGATAGCAATGGGAGCATATCAACCCCATCATACATGGGAACAGAAAGGGGGACACCCTCACGGCCAGGTATACGGGTATAGAATGTCTTTGTGGGCAGAACATCTAGGTATGGTTGATGATTGCTTCAAGGAGCCTAACAGTTTTGAATGCGTGAAGAAAGTGAACAAGATTGCGAATGAAAACTGGAACAAGTACACAGCTGATGAGTTCAGTCCATTACAGGGGCACCTTCTGAAATATCCAATACATGTAGATGTGAATGGCAAGGTACGTCCCACACCTGGATCTGAAAATTTTCCTGATGTGGGTGGCAAGATACTTGGCAGCTGGACTCCCCTTCCTGATGTCCTCACTACGTAA 2814 0.4446 MITVAGAVICPNVAFGYVFDEETSSRSPPLDMQVRALLWIFVGENVPLVKPPGRLCSAFFTRNANSRGSKHITCFSDWRSEIPIFFDRANGSMMGDKSENVVYLHGDLDLKILEARFLPNMDLLSERVSQFFSLFNSCTTSVSGTPRRHRHRKIITSDPYVKVCLAKATVARTRVISNSQDPTWNEHFKIPLAHPVSQVEFYVKDNDIFGADLIGVATVSAERILSGEFISDWFPVLGSNGKPPKPDCAIRLEMKFTKCEDSPLYTYGISSNPDRFKVRDSYFPVRHGGSVTLYQDAHVPESMVPKIELENGVFFQQGRCWEDICHAVLEAHHLVYIVGWSIYHKVKLVREPTKPLPNGGDLSLGDLLKYKSGEGARVLLLVWDDKTSHNKFFIKTDGVMRTHDEETRKFFKHSSVFCVLSPRYASSKLSFMKQQVVGTLFTHHQKCVIVDTQATGNNRKITAFIGGLDLCDGRYDTPQHRLFQDIDTVYKDDYHNPTVPVGMKGPRQPWHDLHCKIEGPAAYDILTNFEQRWRKATKWRELGQKFKKVSRWHDDSLLKLERISWILSPSAFISNDDPELWVSKEEEPENWHVQIFRSIDSGSLTGFPKDVYEAENQNLVCAKDLVIDMSIQTAYIQAIRSAQHFIYIENQYFVGSSFAWPSNKEAGADNLIPMELALKIVSKIRANERFAVYVVIPMWPEGVPSSAAVQEILFWQRQTMQMMYEIIVQELKSMRIHDRRPRDYLNFYCLGNRVNWPAEVLGSNNSAPDNCDTVSASQKFQRFMIYVHAKGMIVDDEYVLLGSANINQRSLAGSRDTEIAMGAYQPHHTWEQKGGHPHGQVYGYRMSLWAEHLGMVDDCFKEPNSFECVKKVNKIANENWNKYTADEFSPLQGHLLKYPIHVDVNGKVRPTPGSENFPDVGGKILGSWTPLPDVLTT 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1336 937 SMART C2_3c 107 233 IPR000008 -
Acco10g1336 937 PANTHER PHOSPHOLIPASE D 97 926 IPR015679 -
Acco10g1336 937 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 439 474 IPR001736 GO:0003824
Acco10g1336 937 Gene3D Endonuclease Chain A 313 558 - -
Acco10g1336 937 Gene3D Endonuclease Chain A 604 831 - -
Acco10g1336 937 Pfam Phospholipase D C terminal 857 927 IPR024632 -
Acco10g1336 937 Gene3D C2 domain 105 264 IPR035892 -
Acco10g1336 937 ProSiteProfiles C2 domain profile. 89 234 IPR000008 -
Acco10g1336 937 Pfam C2 domain 106 236 IPR000008 -
Acco10g1336 937 SMART pld_4 783 810 IPR001736 GO:0003824
Acco10g1336 937 SMART pld_4 439 474 IPR001736 GO:0003824
Acco10g1336 937 FunFam Phospholipase D delta 311 555 - -
Acco10g1336 937 Pfam Phospholipase D Active site motif 784 810 IPR001736 GO:0003824
Acco10g1336 937 Pfam Phospholipase D Active site motif 440 474 IPR001736 GO:0003824
Acco10g1336 937 SUPERFAMILY Phospholipase D/nuclease 280 543 - -
Acco10g1336 937 CDD C2_plant_PLD 101 257 - -
Acco10g1336 937 SUPERFAMILY Phospholipase D/nuclease 631 866 - -
Acco10g1336 937 PIRSF PLD_plant 93 937 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco10g1336 937 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 104 258 IPR035892 -
Acco10g1336 937 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 783 810 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1336 Acco-ChrAcco10 27206076 27213144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1336 92 936 Phospholipase D Gene Family (Wang group) AT2G42010 52.968 0.0 942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1336 10 27206076 27213144 Acco10g1336 10 27206076 27213144 ECH