LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco10g1317	ATGGAGAAGAAGATGATGAGGACAATAGTGGTGGTGTTAATAACTTTAGTGTGGAGTGGAAATTTGTGGGCAAAAGGGGAAGGGTTGATAAAGTTACCTGGAAATGAGACAGTGCCTGGTCTCATGATATTTGGGGACTCAATTATGGACACGGGAAGTAACAATGATCTTAGAACACCTGCCAAGTCTAACTTTCCTCCTTATGGCAGAAACTTTGATGGTGGCAGACCAACCGGCAGATTCTCTAATGGCAAAGTCCCTTCTGACTTCATAGCTCAAGAACTGGGTATTAAGGAATTTGTTCCTGCCTACAAAGACTCTAATTTGCACCCCAATGACCTCTTGACTGGTGTCAACTTTGCTTCTGGTGGTTCGGGATACGATCCTTTGACCCCAAATATTCTGTCGGTGATACCATTATCTGATCAACTGCAACAATTCAAAGAATACATTGGGAAGCTAAAACAAAATTTCGGAGAAGAGAAAACAAATTTTGTATTATCAAAAAGTCTAGTCCTTGTTGTTGCAAGCGCCAACGACATTGCCAACTCTTATTTTGCCACTGGACTTAGGCGAATGCAATATGATATTCCCTCTTACACTGACCTCTTGCTCCACCATGCCTATTCCTTCTATCAGGAATTGTATGGATTAGGAGCAAGAAGAATCGGAGTGTTCAGTGCACCTCCACTGGGATGCATGCCTTCGCAGAGAACTATGTTTGGAGGATTAGGGAGAGAATGTTCGCCAGACACAAACATGGCGTCACAAATGTTCAATGTGAAACTATCAGCAGAACTGAACTCACTAAATCACAATCTGCCACATGCCAAGTTCGTGTACATCGATGTTTACGAGCCTCTTCTTCATATCATCGAGAACCCAGCCAAATATGGGTTTGACGTAGTGGATAGAGGATGCTGTGGGACAGGGACGATGGAGGTGTCAGTGTTGTGTAATAGGCTTCTTCCTCAGACTTGTGCCGATGAGTCAAAGTATGTGTTTTGGGATAGCTACCATCCCACTGAGAGAACTTACAAGATTCTGGTGGATTTGGTTCTCACCAAATACATCTCCAACTTCCTCTGA	1089	0.4334	MEKKMMRTIVVVLITLVWSGNLWAKGEGLIKLPGNETVPGLMIFGDSIMDTGSNNDLRTPAKSNFPPYGRNFDGGRPTGRFSNGKVPSDFIAQELGIKEFVPAYKDSNLHPNDLLTGVNFASGGSGYDPLTPNILSVIPLSDQLQQFKEYIGKLKQNFGEEKTNFVLSKSLVLVVASANDIANSYFATGLRRMQYDIPSYTDLLLHHAYSFYQELYGLGARRIGVFSAPPLGCMPSQRTMFGGLGRECSPDTNMASQMFNVKLSAELNSLNHNLPHAKFVYIDVYEPLLHIIENPAKYGFDVVDRGCCGTGTMEVSVLCNRLLPQTCADESKYVFWDSYHPTERTYKILVDLVLTKYISNFL	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco10g1317	362	SUPERFAMILY	SGNH hydrolase	119	354	-	-
	Acco10g1317	362	PANTHER	GDSL ESTERASE/LIPASE EXL3	14	351	-	-
	Acco10g1317	362	FunFam	GDSL esterase/lipase APG	30	358	-	-
	Acco10g1317	362	CDD	SGNH_plant_lipase_like	39	357	IPR035669	-
	Acco10g1317	362	Pfam	GDSL-like Lipase/Acylhydrolase	41	352	IPR001087	GO:0016788
	Acco10g1317	362	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	41	52	IPR008265	GO:0006629\|GO:0016298
	Acco10g1317	362	Gene3D	SGNH hydrolase	31	358	IPR036514	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco10g1317	Acco-ChrAcco10	27052849	27055857	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco10g1317	35	349	Pollen Coat Proteome	AT1G75910	40.881	3.26e-75	234