Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1316 ATGGAAGTAGTGTTGAGGAGAGAGTGGTTGCCATGTTGGTGGAACACAGTGATGCGTTTGGTGGTGGTGTTGTGTGCTTTGAGGGAAACAAGGGGAGTGGTGAAACTACCACCGAATACGACAGCTCCACCAGCAGTGATAGCTTTTGGAGATTCAATATTGGACACTGGAAATAATAACAACATTAAAACCCTCGTCAAGGCCAATTTCCCTCCTTATGGAAAAGATTTCCAGGGTGGTATCCCCACCGGCCGATTTTGCAATGGCAGGGTTCCTTCTGACCTCTTAGTGGAAGAGCTAGGGATTAAGGAGTATTTGCCAGCTTATTTGGATCCAAACCTGAAGCCAAGTGATCTTCCAACTGGTGTCTGCTTCGCCTCCGGTGCCTCTGGCTATGACCCTTTGACACCTAAAATAACGTCGGTGATACCAATGTCGGATCAAGTAGAGATGTTTAAGGAATATATAGAGAAGCTGAAGGGAATAGTGGGAGAGGAGAGAACAAAGGAGATAGTAGGAAATAGTCTGTATGCGGTGGTGGCAGGAAGCGACGACATAGCCAACACTTACTTCATAGCTAGAGTCAGGCAACTTCAATATGACATTCCCTCTTACACTGATCTTATGGCCAACGGAGCCTCTGATTTCTTGAAGCAAATATACGAGCTTGGGGCAAGGAGGATCGCAGTGCTGAGTGCACCACCAATCGGATGTGTTCCCTCACAAAGAACTCTAGCTGGTGGAATTGTAAGACAATGTGCTGATAAGTACAACGAAGCTGCCAAATTATTTAATTCCAAACTCTCCAGTCAGATCGATTCTCTCTCTCGCACTTTGCCTAATTCCAGACTCGTCTTCGTTAATGTCTACGACTCTCTCCTTGATATCATCCTCAACTACCAAAAATACGGGTTTAAAGTTGTGGACAAGGGGTGTTGCGGTACTGGTAGTATTGAGGTTGCTGTGTTGTGCAACCGTTTGGCTCCCACGTGTCCCGATGTCTCCAATTATGTGTTTTGGGATAGCTATCATCCTACAGAAGGAGTATACAAAATACTCATTGATCAAGTTCTTCAAATATATCTCCCTCGTCTCCTTGCTTAG 1104 0.4538 MEVVLRREWLPCWWNTVMRLVVVLCALRETRGVVKLPPNTTAPPAVIAFGDSILDTGNNNNIKTLVKANFPPYGKDFQGGIPTGRFCNGRVPSDLLVEELGIKEYLPAYLDPNLKPSDLPTGVCFASGASGYDPLTPKITSVIPMSDQVEMFKEYIEKLKGIVGEERTKEIVGNSLYAVVAGSDDIANTYFIARVRQLQYDIPSYTDLMANGASDFLKQIYELGARRIAVLSAPPIGCVPSQRTLAGGIVRQCADKYNEAAKLFNSKLSSQIDSLSRTLPNSRLVFVNVYDSLLDIILNYQKYGFKVVDKGCCGTGSIEVAVLCNRLAPTCPDVSNYVFWDSYHPTEGVYKILIDQVLQIYLPRLLA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1316 367 CDD SGNH_plant_lipase_like 44 359 IPR035669 -
Acco10g1316 367 PANTHER GDSL ESTERASE/LIPASE EXL3 24 357 - -
Acco10g1316 367 Pfam GDSL-like Lipase/Acylhydrolase 46 356 IPR001087 GO:0016788
Acco10g1316 367 Gene3D SGNH hydrolase 39 362 IPR036514 -
Acco10g1316 367 FunFam GDSL esterase/lipase APG 34 362 - -
Acco10g1316 367 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 46 57 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1316 Acco-ChrAcco10 27044849 27047541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1316 44 359 Pollen Coat Proteome AT1G75910 42.320 1.24e-81 251
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2990 05 44493291 44495302 Acco10g1316 10 27044849 27047541 CCT
Acco10g1316 10 27044849 27047541 Acco10g1316 10 27044849 27047541 ECH