Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1275 ATGTGCAGAGAGAAATTGGGATTAAGAAAGACCAGAAGGGTTGGAGCAGAGAGGGCAGTGATGAAGGAAACAGTGAAGAAATGGTCAAGTCAGATGAAGAAGAAGGAAGAGGAAGAAGAAGAAGAAAAGGGTTTGCCAACGGACGTTCCAAAAGGTCATTTTGTGGTGTATGTGGGAGAGAAGAGAAGTAGATACATTGTGCCTATTACGTTTCTGAGACACCATGAGTTTCAGACTCTGCTTCATGAAGCAGCTCAAGAGTTTGGGTTTTGCCATCAAAGTGGTCTCACTATTCCTTGCCAACAGCATGTTTTTGAGTCTCTTGTAACTAAATTGCTCCGATCATGA 348 0.4282 MCREKLGLRKTRRVGAERAVMKETVKKWSSQMKKKEEEEEEEKGLPTDVPKGHFVVYVGEKRSRYIVPITFLRHHEFQTLLHEAAQEFGFCHQSGLTIPCQQHVFESLVTKLLRS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1275 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 108 IPR003676 GO:0009733
Acco10g1275 115 Pfam Auxin responsive protein 28 110 IPR003676 GO:0009733
Acco10g1275 115 MobiDBLite consensus disorder prediction 27 46 - -
Acco10g1275 115 Coils Coil 18 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1275 Acco-ChrAcco10 26688443 26688790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1275 5 109 Calmodulin-binding Proteins AT3G43120 37.037 3.56e-19 75.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1275 10 26688443 26688790 Acco10g1275 10 26688443 26688790 ECH