Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1268 ATGTCCACCACCCAACAACCTACTGACTCCCACACCAACCCTCTCACTCAAATGATTCAGAGCGTCTTCTCCGACAACAGCAACATCATGCTCGCCGCCATCATCTCTCTCCTCCTCGTCATCCTCTTCGTCCTCCTCCTCCACCTCTACGCCAAATGGTTCCTCGCCCACGCTCATGCCCAATCCCAATCCCGCCGCCCTCCCTCCGTCACCGTCTCCGAAGTCATTGGCCCCGCCCGCTTCCACCACTTCCACACCTTCAACCTTCAAGACTCCCCCATTTCCCACTCCCCCACTAAAGGCCTCGATTCCGCTTCCATTTCTGCCATCCCTGTTTTCGTATACGAAGCAGAGAACACACTGCATCAAGTAGCCGATGAAAGAGATTTGGAATGTGTAATTTGCTTGAGCGTTTTCCAGAACGGAGAAACCGGCCGGAGCTTACCCAAGTGTCGTCACGCTTTTCATGTCGAGTGTATCGATGTGTGGCTCAGCTCGCATTCGAATTGCCCAATCTGCAGGGCTCCGATCGGGGAGCTTGATTCTCAGTTTGGCTCTGTTCTTGAGGATGATTCCTCTGCTGTGCTTGAGATTGTGATCGATAATTCTCCGAGTTCTGAGATCATCAGCGACAACGCCGACGGTGGAGCTGAGGGTATTAGTATTAGTACTAACAATAATAATGATAATGATATTGATCAAGGAGTAAGTGACTCTGTTATTTCTATATCAGAAACTACTACATCCTCATTGTTGGGTTGTTCTTTGAAGAGGATGTTCAGTAAAGTTTTTCCTTCTTCCAATGTCACTGAATTAGGCACATCGTAA 828 0.4915 MSTTQQPTDSHTNPLTQMIQSVFSDNSNIMLAAIISLLLVILFVLLLHLYAKWFLAHAHAQSQSRRPPSVTVSEVIGPARFHHFHTFNLQDSPISHSPTKGLDSASISAIPVFVYEAENTLHQVADERDLECVICLSVFQNGETGRSLPKCRHAFHVECIDVWLSSHSNCPICRAPIGELDSQFGSVLEDDSSAVLEIVIDNSPSSEIISDNADGGAEGISISTNNNNDNDIDQGVSDSVISISETTTSSLLGCSLKRMFSKVFPSSNVTELGTS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1268 275 FunFam RING-H2 finger protein ATL1 90 179 - -
Acco10g1268 275 CDD RING-H2_EL5-like 131 174 - -
Acco10g1268 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 178 IPR013083 -
Acco10g1268 275 ProSiteProfiles Zinc finger RING-type profile. 132 174 IPR001841 -
Acco10g1268 275 SMART ring_2 132 173 IPR001841 -
Acco10g1268 275 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 178 IPR044675 -
Acco10g1268 275 Pfam Ring finger domain 131 174 IPR001841 -
Acco10g1268 275 SUPERFAMILY RING/U-box 122 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1268 Acco-ChrAcco10 26615411 26616238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1268 23 180 Rapid Response to Elicitors AT3G16720 36.709 4.16e-29 110