Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1262 ATGACTTCTTGGGTAAGAGGGAATTGTATCGGTAAAGGTGCGTTTGGCACCGTCAGTGTTGGGATTGACCGTTGGGACGGTCGGGTTTTTGCGGTGAAATCGGTGGATCTCGAGATGGGTCTTCCGGTTCAGGTGAAGGCTTTGGAGAATGAGATTCGGATTCTCCGGAGGTTGTCGCCGTCGCCTTACGTGGTGGAGTTCCTCGGGGATGACATGACGGCGTCGTGCCGGAATTTGCACATGGAGTATATGCCGGGTGGCACCCTTGCTGACCTGGCGGCCCGGAATGCTGACATGGACGAAGAGTTAGTGAGGTACTATACGTGGTGCCTGGTGAACGCGCTGAGGCACGTCCACTCCAACGGCATCGTGCACTGCGATGTGAAGGGGAGGAATGTTCTGTTGGGGCTTAACGGTTGCGTTGCGAAGCTCGCCGATTTCGGCTCGACCGTCGAGTTTCCCGGTGAAGTTTGCTCAGCGGCGGTTCTGCCACGGGGGAGTCCGCTTTGGATGGCTCCGGAGGTGATCCGGGGGGAGTATCAGGGACCAGAGTCCGATGTGTGGTCCTTGGGGTGTACAGTGATCGAGATTGTCACCGGAAAGCCGGCATGGGAAGATCACGGTGGCGACACGCTGAGTCGAATCGGATACTCCGACGACTTACCCGAATTCCCGAGTCAAATTTCAGAGCTCGGTCGGGATTTCCTCGAGAAGTGCCTGATGAAAGAACATAAACAACGATGGAGCTGCGATCAGCTGCTGAAGCATCCATTTTTGTCATCTGCATCTCCCAGTAAGCCGGTCGAGTCCTCTCCTCGTTGCGTTCTTGAATGGGACAACTTAGAATTCGCCGAAGAGGATGAAGTAGAAGGGGAAATCAGATTTGATAACAATGCTGGAGCCTCAGCTAAGGAAAGAATCCGTAAATTGGCCACGACACTGAGGGCAGATTGGGAAACAGAAGATTGGGTGGCGGTGAGAGGACCGACGTCAGACGCAGAAGCTACAGCAACGGAAACAGGGGAGGGTGGAAGTGGAAGTGGGGACGAAGAAGGGGCAAATTCGGAATATCCGCATCGGACAGGGGTAGAAGAGGAAATGAAAGCAGGGACAAGTCAAGAGTATTCGAATAATGTAGGGAGGGTAAAATGGGAAAGGGAAGATCCGGGGAAGTGGGAATTGGATGACCGGTTGTTGGTGAGGTGGCGGTGTAAACACAGGGAAAGGAGCGAAAGAGGCAACTTAGCTGGTCGGAGCTGTCCATCTACGTATATGTCAGAAAATGTAGATTTACATTTAATGCTGAGGATAATAAAATTAATGATTCGCATTATTCACAGCATGTGTTGTAAATTACTCAAATCATGTTACTTAAATTCCTTACCATTAATATATTATTTAAAATCAATTGTTTATTTTCTACCGTCTTTCCTTGAACATGCCAAGAAAATGTGGTAA 1458 0.5055 MTSWVRGNCIGKGAFGTVSVGIDRWDGRVFAVKSVDLEMGLPVQVKALENEIRILRRLSPSPYVVEFLGDDMTASCRNLHMEYMPGGTLADLAARNADMDEELVRYYTWCLVNALRHVHSNGIVHCDVKGRNVLLGLNGCVAKLADFGSTVEFPGEVCSAAVLPRGSPLWMAPEVIRGEYQGPESDVWSLGCTVIEIVTGKPAWEDHGGDTLSRIGYSDDLPEFPSQISELGRDFLEKCLMKEHKQRWSCDQLLKHPFLSSASPSKPVESSPRCVLEWDNLEFAEEDEVEGEIRFDNNAGASAKERIRKLATTLRADWETEDWVAVRGPTSDAEATATETGEGGSGSGDEEGANSEYPHRTGVEEEMKAGTSQEYSNNVGRVKWEREDPGKWELDDRLLVRWRCKHRERSERGNLAGRSCPSTYMSENVDLHLMLRIIKLMIRIIHSMCCKLLKSCYLNSLPLIYYLKSIVYFLPSFLEHAKKMW 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1262 485 SUPERFAMILY Protein kinase-like (PK-like) 3 273 IPR011009 -
Acco10g1262 485 Gene3D Transferase(Phosphotransferase) domain 1 2 320 - -
Acco10g1262 485 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Acco10g1262 485 CDD STKc_MAPKKK 3 259 - -
Acco10g1262 485 MobiDBLite consensus disorder prediction 327 357 - -
Acco10g1262 485 ProSiteProfiles Protein kinase domain profile. 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1262 485 SMART serkin_6 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1262 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Acco10g1262 485 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1262 485 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 331 - -
Acco10g1262 485 FunFam Serine threonine protein kinase putative 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1262 Acco-ChrAcco10 26545701 26547657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1262 4 371 MAP Kinase Kinase Kinase AT1G07150 54.545 8.34e-129 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco10g1262 Pkinase 1.3e-55 CL0016