Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1257 ATGGGGAGTGAGGACCTTTTCTTTGCTCAGAACCAGTCTTCAATGGCGGTGGAGGAATTGGAGTCCCCGCTTTACAGAAAGCGCAAACGAGGGTATGGAAGAAGAAAGCTCATCGTCAATGACAGAGTGGAGGTGAGGAGTACGGAAGATGGCTTTTTAGGTTCATGGCATCCAGGGACTGTGATTCAATGTGGGGAGCAGAAACGTCATGTTCAATATGACAATCTTTTAAATGAGGATGGATCAACTTATCTTGTCGATATAGTGCGTGTTCCAGATATTTTGGATGGCGAAAGTTCCACAATTTACAATCAACGTGGACTTATTAGACCGATACCACCTTTGAAGGAGTTCAGTAATTGGGACCTTCCGTTTGGTCTATGTGTTGATGTGAATTATGAAGAAGCTTGGTGGGAAGGTATAATGTTTGATCACAATGATGGGATGAATGAGAGATCCATATTTTTCCCAGATTTGGGTGATGAAATGAAGGTCCAAATTGATCATATACGTATTACTCATGACTGGAGTGAAGTTACCGAGGAATGGGAGAGACGAGGCATGTGGGTATTTCTTGAATTGGTTGAAGAGTTTGAACAGAATTTTTATGTTGCAGTTTCAGTAAAGCAAATCTGGTATGATGTGCGTGCCAAAGAAAATTTCAGTAAGATTAAAGACTGGACTTGTAATGTGAAGGACTTGTGGAGAGGTCTGGTTCTTGAGGTAATTAATGACTACTTTTTACTAACAATGGGAGAAGTTCTCAAGGCCATCGATCTTTCAAAAGATGATCGCTTGATGGAAGCACCAGGACCAGAGTCAGGTGAACCTACTGCTGATATTCACTTAAATCTTGAAAGAAGTTCAGACAAATTTCCTTCTGTTTCAAATTCTGATGATCGGTTAACTAGCAAATCAAATGTTCTTTATGATGCTGGTCCTAATAATGCATTTGTCGATTGCATAACTTTGACTGAGAACCATTTGGTAAAAGGTGACTCGTCAAATTTCTTAGATGCTGATCAAAAGAGTGGTAACATCATTCATATCCAGAAGAAATACGATTTGGAGACTTTGGGGGATAGTGTGTCAAATACGCCTGCGGTGGCAGACTTAGACATGTCCTTCCTTGAGAATGAAGAATTCGTGCAGCAGGAATCTATATTACCAGATATTCCTGAAGGAATTCCTGGTCAGGATTGTGGTACTGCTGGTGAAGTAAATTATGGTGCTGGGAGTTATAAAAATAATAGACAAGGGGGATCATCAACTTGCAAAAGGTCGACTGAATGGAAACCTCTGATACTTTCTGAAGTTAAACTCTCTCCTGATTCTGTTCATCAATATGCACTTGCATCTGGGAGGAAGGTCTGGGAACAACTGAAGACAGATGTCAGAAAACATATTGCATATCTTGGATGGAAAATTGAGTGGAAGCAACATCTTAATGGCTATCAACAAAGACAATTTAGGTACACCTCACCTGCCATAGAGGGAAAACAGGTAGTTTACATGTCACTTCGTGAAGTTTGTCGACATATTGAAAAGGACACCAATATGGACCCTTTGTTGGTCAAAGAGGATCAGAGAAGGACGTGTTCAATTGACAGTAATGTTTCACATCCTGAAATTTTGCCACTACCTGATGCCGAAGACATAGTTGAACGCGACTATTACCCTGAAGCTGTTTTGAGATATTACCTGCTTCCGTTAGAGGGTGGCCACGCTGATGTTAAAAGGATTGTGATGCCGAAGGCAAGAAAACACCTGTTAGCAGAAGGATGGACTTTTGAGAATCCAACCATAAGTAGAAGGGGAGTTATCTACATTTCACCACAAAATCTGCGTTTTGGATCACTTCGAGCAGCATGCAGAAAATGTATTGAAGAAGGTCTTCCCAAGTGGATTAGTTCTGGAGTAATACCTCCGGATGTTTCAAGGATAAATGAAGAGAACACTGGTCTGGTTGACAGTGATGACTTATTGTGCTGTGTGTCCCAATTGCTTCAAAACGAGCCTGAATTGTATAATGTAAATGGTGCACCAGCAAGCAGATTAATTGGGCAATGCAAGCCAAAACCCTCGAGGAAGCTAAAGTCCCAAGATAATCAGAGAGAGATGTATTCTACATCTGACAGTGATATCTCACTTCCTGCAATTTTGCCACCTCGTTCTGTTGAAGATGTAATTGAACCTGAATTTTGTCCTGAAGCTGTTTTGAGATATTACGTATATTCACTGGAGAAGATCCCCAAGGATGTTAAAAAATGCATGATACTAAAGGCAAGAAAACACCTGTTAGCTGAAGAATGGAATCTTGAGTATCCAACCATAAAGGGAAGGGGAATGATCTATACGTCACCACAAAATGTGCGTTTTGGCTCACTTCGAGTAGCGTGTGAAACACTTATTAAAGAATGTCTTCCTAAGTGGATTCGTTCTAGAATGATGCCTGTAGAAGGTTTGGACATAAATGAAGAGAAAATGAGTCAAGTTGACAGTGATGAGCTAGCATCCTATGTGTCCCAATTGCTTCAAAAGGAGCCTGAATTGTCTTATTTAAACAAGGTACCAGAAAGCAGATCAACTGGGCATTGCAAGCTCAAACCCTCCAGGAATCTAAAATCTAGGCCACCAAAGATCCAGAAGAAAAGATTGCCTATTCGGCTACAAAGATCAAGCAAAAGGGTGCAGAAGGTGTGTGCTCCTTGTTCATCAAACCAGAAAGCTCAAAATGTCCTGTCCTGGTTAATAGACAGCAATGTGTTGTTACCAAGATCTAAGGTACATTACCAGGCAACAGTCACAGGTCGTCCTATGGTTGAGGGGCGAATAACTCATGATGGAATCAAGTGTAGCTGTTGTCAGAAACTATATAGTATTGGTGGCTTTGGAGGTCATGCAACTGGTCAACGTAATTGCAGGTCAGCAGCCGCTAATATTCTTTTGGAGAATGGGAAGTCTCTCCTAGATTTCCAGAGGCAGATAATGAATGAACATAGGACAAGAGGAACTACAAAAACACCTTCGAGAAGTGGATATCTAGATGATAATGATGGCATTTGTTCTGTTTGTCAATATGGTGGTGAACTAATATTATGTGATAATTGCCCATCTTCTTTTCATCAAAGCTGCATAGGTTTGGAGGATATCCCTGAAGGTGACTGGTTTTGTCCAGCCTGTTGTTGTGGGATTTGCCACCAAAGTAAACCTGAAGGGTCTGATGATGAAACACTTTTGACTTGCAGTCAGTGTGAACATAAATATCATGCTAAGTGCTTGGGAACAAGGTCTGTATCAATGTCAGGAAGATGTCCGAAAAATTGGTTTTGTGGAAAAAGTTGTGAGAAGATACATGCAGGTCTTCATAAGCTATTAGGAGAACCTATTGCAGTGGGCGTGCACAATTTAAACTGGACGTTGCTGAAGTGTGTTGACTATGAGACTTGTGATGTTGGGAATGATAGAAATGACCTAGAGGTGGAGAGTTACAGCAAACTCAATGTGGCGCTTTCAGTGATGCATGAATGTTTTGAGCCCTTGAAGGAATCTTACTCAGGCAGGGATGTCGTGGAAGATGTTATTTTCAGCAGACGGTCAAAGCTTCATCGATTGAACTTCCAAGGTTTCTATACTGTACTTCTGGAGAGAAATGAAGAAGTGGTAACTGTGGCAACTGTTAGGGTCTATGGAGAGAAGGTAGCAGAATTACCTCTTGTTGGTACCAGATTTCAGTATCGTCGCCTTGGAATGTGTCGCATTTTAATGGATGAGCTTGAAAAGAGGCTCATGCAACTAGGGGTAGAGAGGATAGTTTTGCCTGCTGTTCCAAGTGTGGTAGATACGTGGGTCAACTCTTTTGGCTTTTCAAAGATGACAAATTTTGAGAGATCACAGTTTCTGGACTGTACTTTTCTTGACTTCCAAGATACCGTCATGTGCCAGAAACTCTTGACCAAGAATCGTCCAGCTCTAACTTGGTCACCAGAGAGCCATACAAAACCACCTGAAGTTTTATCTGTAAGTGGTGGTACTGGTTTTGATCATCAGTCCAGTCTAGTATCTGAAGTATATCAGGCAGAATATATTGACAGAAATGAGACTATGGATCTACAAACAGTGGATGCTTCTGCCGGCAACGATGTTCATCTTGGTAATGATGCCCCTATTCCAGTTAACATGGTGAAGCCGGCGAATTCTAAGGCCGAACAATCACAGAATGGAAACATTCCAGGATGCTCATTTGAAGATGGCCACCGCTTAAAACATGTTTCCACCAGTAATGCTGCTCCATATAAGTACTACGAGCGAAGGAAAACCAGCATGAAAAGATGA 4335 0.4138 MGSEDLFFAQNQSSMAVEELESPLYRKRKRGYGRRKLIVNDRVEVRSTEDGFLGSWHPGTVIQCGEQKRHVQYDNLLNEDGSTYLVDIVRVPDILDGESSTIYNQRGLIRPIPPLKEFSNWDLPFGLCVDVNYEEAWWEGIMFDHNDGMNERSIFFPDLGDEMKVQIDHIRITHDWSEVTEEWERRGMWVFLELVEEFEQNFYVAVSVKQIWYDVRAKENFSKIKDWTCNVKDLWRGLVLEVINDYFLLTMGEVLKAIDLSKDDRLMEAPGPESGEPTADIHLNLERSSDKFPSVSNSDDRLTSKSNVLYDAGPNNAFVDCITLTENHLVKGDSSNFLDADQKSGNIIHIQKKYDLETLGDSVSNTPAVADLDMSFLENEEFVQQESILPDIPEGIPGQDCGTAGEVNYGAGSYKNNRQGGSSTCKRSTEWKPLILSEVKLSPDSVHQYALASGRKVWEQLKTDVRKHIAYLGWKIEWKQHLNGYQQRQFRYTSPAIEGKQVVYMSLREVCRHIEKDTNMDPLLVKEDQRRTCSIDSNVSHPEILPLPDAEDIVERDYYPEAVLRYYLLPLEGGHADVKRIVMPKARKHLLAEGWTFENPTISRRGVIYISPQNLRFGSLRAACRKCIEEGLPKWISSGVIPPDVSRINEENTGLVDSDDLLCCVSQLLQNEPELYNVNGAPASRLIGQCKPKPSRKLKSQDNQREMYSTSDSDISLPAILPPRSVEDVIEPEFCPEAVLRYYVYSLEKIPKDVKKCMILKARKHLLAEEWNLEYPTIKGRGMIYTSPQNVRFGSLRVACETLIKECLPKWIRSRMMPVEGLDINEEKMSQVDSDELASYVSQLLQKEPELSYLNKVPESRSTGHCKLKPSRNLKSRPPKIQKKRLPIRLQRSSKRVQKVCAPCSSNQKAQNVLSWLIDSNVLLPRSKVHYQATVTGRPMVEGRITHDGIKCSCCQKLYSIGGFGGHATGQRNCRSAAANILLENGKSLLDFQRQIMNEHRTRGTTKTPSRSGYLDDNDGICSVCQYGGELILCDNCPSSFHQSCIGLEDIPEGDWFCPACCCGICHQSKPEGSDDETLLTCSQCEHKYHAKCLGTRSVSMSGRCPKNWFCGKSCEKIHAGLHKLLGEPIAVGVHNLNWTLLKCVDYETCDVGNDRNDLEVESYSKLNVALSVMHECFEPLKESYSGRDVVEDVIFSRRSKLHRLNFQGFYTVLLERNEEVVTVATVRVYGEKVAELPLVGTRFQYRRLGMCRILMDELEKRLMQLGVERIVLPAVPSVVDTWVNSFGFSKMTNFERSQFLDCTFLDFQDTVMCQKLLTKNRPALTWSPESHTKPPEVLSVSGGTGFDHQSSLVSEVYQAEYIDRNETMDLQTVDASAGNDVHLGNDAPIPVNMVKPANSKAEQSQNGNIPGCSFEDGHRLKHVSTSNAAPYKYYERRKTSMKR 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1257 1444 SMART agenet_At_2 35 96 IPR014002 -
Acco10g1257 1444 SMART agenet_At_2 121 178 IPR014002 -
Acco10g1257 1444 PANTHER PHD FINGER PROTEIN 12 746 1391 IPR042163 GO:0003714|GO:0045892
Acco10g1257 1444 CDD NAT_SF 1213 1273 - -
Acco10g1257 1444 Pfam Agenet domain 40 114 IPR008395 -
Acco10g1257 1444 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 996 1063 IPR013083 -
Acco10g1257 1444 ProSiteProfiles Zinc finger PHD-type profile. 1019 1064 IPR019787 -
Acco10g1257 1444 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1198 1297 IPR016181 -
Acco10g1257 1444 Pfam Tify domain binding domain 943 995 IPR032308 -
Acco10g1257 1444 SMART PHD_3 1063 1116 IPR001965 -
Acco10g1257 1444 SMART PHD_3 1021 1062 IPR001965 -
Acco10g1257 1444 SMART ring_2 1022 1061 IPR001841 -
Acco10g1257 1444 SMART ring_2 1063 1108 IPR001841 -
Acco10g1257 1444 CDD Tudor_Agenet_AtDUF_rpt1_3 39 114 - -
Acco10g1257 1444 Pfam PHD-finger 1021 1063 IPR019787 -
Acco10g1257 1444 CDD PHD2_CHD_II 1022 1061 - -
Acco10g1257 1444 Gene3D - 1169 1318 - -
Acco10g1257 1444 SUPERFAMILY FYVE/PHD zinc finger 1008 1061 IPR011011 -
Acco10g1257 1444 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1157 1318 IPR000182 GO:0016747
Acco10g1257 1444 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1064 1118 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1257 Acco-ChrAcco10 26479805 26486640 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1257 37 262 PHD Transcription Factor Family AT5G58610 44.348 7.40e-60 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco10g1257 Agenet 1.8e-15 CL0049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco10g1257 10 26479805 26486640 Acco10g1257 10 26479805 26486640 ECH