Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1253 ATGGGTTACTTCTCTTGCAGAGCTGAATCTGCCGTTTCTACCTCCAATTCTGTATCCCCATCTTCCTCCTCTAAACCCTCCTCTGTTTTCTGCCCATATGGAGATCTCTTTGATTCGAAAGATAGACTTCTGGTTGTGGAGTTCATGAGCAATGGAACCCTCTACGATGTTCTTCATTCTTCTGCACGACCACCCAATTGGGGTCGTAGAATCCGATTGGCTCTGCAAACTACAAAGGCCATCGATACCCTTCATTCCTCAACTCCACCTGTAATTCACCGAGATATCAAATCTGCGAATGTTTTGATTGATCGAAACTTCAATGCTCGATTGGGAGATTTTGGGTTAGCCTGCAAGGCCATGAAGATGATAAATTGA 378 0.4444 MGYFSCRAESAVSTSNSVSPSSSSKPSSVFCPYGDLFDSKDRLLVVEFMSNGTLYDVLHSSARPPNWGRRIRLALQTTKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLACKAMKMIN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1253 125 Pfam Protein kinase domain 38 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1253 125 MobiDBLite consensus disorder prediction 8 28 - -
Acco10g1253 125 Gene3D Transferase(Phosphotransferase) domain 1 27 123 - -
Acco10g1253 125 MobiDBLite consensus disorder prediction 1 28 - -
Acco10g1253 125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 91 103 IPR008271 GO:0004672|GO:0006468
Acco10g1253 125 PANTHER OS01G0253100 PROTEIN 39 118 - -
Acco10g1253 125 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1253 125 SUPERFAMILY Protein kinase-like (PK-like) 33 120 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1253 Acco-ChrAcco10 26445795 26447001 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1253 38 117 Receptor kinase-like Gene Family AT3G58690 49.425 3.93e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Acco10g1253 Pkinase 3.2e-16 CL0016