Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1248 ATGACAAATTTACCCTCATCTCTTATTCCCATTCCTTTCATCGTCTTCTTGCTTTCTCTGCTCTTACCGACCCCTGTCAACGGCCTTGGCTCTGCATCAACCACCGCCGTAGTCTATGGAACCGGTACCTTCTGCGGCATTGTTGCCGGCGAACCCACCCAGAGGATCCTATGCTATCAAAACGGTATGACTATCCAAGTCTATCCCAATGTCTCCTTCCAAGCCATCTCCGGTGGCCGGAGCTTCCTCTGCGGCCTCCTCTCCGGCGGATTCACCCTCCTTTGTTGGGACACCACAGATTCATACTTTCCCTTTCAGCCGAGACGCTTGTATCACAGCAACACAGTCTCATTGACCGATCTAACAGTTGGAGATACTCAGGTTTGTGCCAGAGCGTTGAACACTGGTATTGTAAGTTGCTGGAGAGGGAAAGACGGAAACGGCCATGAGTTTCCTTCTCCTAATGAGGACCTTTATTTTCGCGGGATCACATCTGGGTGTGGTTTTTCTTGTGGGATTCTGAAAGAAAACAATAGTGTTCATTGTTGGGGTCAGAGAGAAAGTAATGGGGATGAGATTCAGAGACAGTTTAGGAATCTTTCAATGTCAACGATAGTTGGAGGAGAATCCCATGTTTGTGGTTTGACCACTAGTGGAGATTTGGTCTGTAAAGGAAACAATAACTCTGGCCAATTGAATATTCCTTTCAGTTCACCTTCAGAATTCTCCAGTCTTGCATTAGGATCGAACTTCACTTGTGCCATTAGAAGCAAAAATGGTCTGGTTATGTGCTGGGGAAGAATCAACATGTCTGAGATAGAGAGTGACATGATTCAGAATGTTTCATTCGAGTCAATTGTTGCTGGTTTGGATTATGTTTGTGGGTTAATGACAGCGAATTTGTCCGTGATCTGTTGGGGACCAGGTCAGTCTGGAAGGCTTGATAATAACAGTAACTCTCATGCAGCAGATCTTCCTTCTTTGGGAATGATAATCCCAGGTCCATGTGTTAAGGATTCTTGTAGCTCTTGTGGTACATATCCGAACTCCGAGGATCTCTGTCACGGGTCTGGAAGAATATGCTACTCCTGCCAAACAGAGAATCCACTCGCAGTGCCATTACCAATCACACCCCAACCACCACCACCATCTTCACCAAATTCTTCAACCCAACCTGCAGAAACAAGATATACAAGAGAAAGATTGATACTTCTGATTTTTGGATCAACTGGTGCTTTTTTGGGTCTCTGTTCAGTTATTTTCTGCTTGAGGTTCGGAACATGTCGTTTATTATTGCAGAGAAAATCTGACAATAATTTAGTTCAAGCCACAAACACTGAAACCGATGTGGATAATACCACTTTTCCCGGTGCTTCAACCACAGACACAACCATAAGATCATTCTCCAGCAAACAACAGAATTCACGGACATTAAGGAGCTACAGAAGAAGTGGGTCATCCTCCGTCGTTGTAATAGACAAGACGGAGACATTCACGTTATCAGAACTCGCCACAGCCACAAACAACTTCTCCATTGACAACAAAATAGGCTCCGGAAGCTTCGGCATTGTGTACAAAGGAAAGCTAGAAGATGGGCGTGAAGTAGCAATCAAACGAGGAGAAACCTGCACGAGAAAGAAGAAATTCCAAGAAAAAGAAAACGCATTCGACTCGGAAGTTGCTTTGTTATCTAGGCTTAATCACATACACCTGGTGAGCCTCATAGGATTCTGCGACGAAAACGACGAGAAGCTCCTAGTCTACGAATACATGACCAACGGATCACTCCACTACCACTTACACGACAATCACAACACCGAAAAAACCAGCAGTACTGTAAATTCATGGCGGGTGAGGATCAAAATCGCACTGGACGCAGCGAGGGGGATCGAGTATCTTCACAATTACGCAGTACCGTCGATAATTCACAGAGACATAAAGTCGTCAAACATACTATTAGACTCAAATTGGAACGCGAGAGTCTCCGATTTCGGATTATCGTTGATGGGCCAGCAAGAGCAGATATCTGCGAAAGCTGTGGGAACGGTAGGGTACATAGATCCAGAGTATTACGTGATGAACGTGTTGACTGATAAAAGTGATGTTTATGGATTAGGGGTGGTTATGTTGGAGCTTTTGACGGGCAAGAAGGCGGTATTTAGGGAGGAGGGTGACGGAGAGTCGACTCCGGTGGGGGTGGTGGAATACGCAGGGCCGAGGATGAGAGGAGGAGAGCTATGGAGTGTGTTGGATTACAGAGTGGGAGAACCAGATGTAAATGAAATTGAAGGTTTGGAGATAATGGCGTATAGTGCGATGCATTGTGTGAGATTGGAGGCGAAGGAGAGACCATGTGTGAGTGAAATTGTGGCGAATCTGGAGAGAGCTTTGGCTTCAGTTGATGGATGTCCTGGTCGGCTCTCTGTTACGGTTTTCTCTTCCTCTGCTCCGTTTGAATGA 2460 0.4569 MTNLPSSLIPIPFIVFLLSLLLPTPVNGLGSASTTAVVYGTGTFCGIVAGEPTQRILCYQNGMTIQVYPNVSFQAISGGRSFLCGLLSGGFTLLCWDTTDSYFPFQPRRLYHSNTVSLTDLTVGDTQVCARALNTGIVSCWRGKDGNGHEFPSPNEDLYFRGITSGCGFSCGILKENNSVHCWGQRESNGDEIQRQFRNLSMSTIVGGESHVCGLTTSGDLVCKGNNNSGQLNIPFSSPSEFSSLALGSNFTCAIRSKNGLVMCWGRINMSEIESDMIQNVSFESIVAGLDYVCGLMTANLSVICWGPGQSGRLDNNSNSHAADLPSLGMIIPGPCVKDSCSSCGTYPNSEDLCHGSGRICYSCQTENPLAVPLPITPQPPPPSSPNSSTQPAETRYTRERLILLIFGSTGAFLGLCSVIFCLRFGTCRLLLQRKSDNNLVQATNTETDVDNTTFPGASTTDTTIRSFSSKQQNSRTLRSYRRSGSSSVVVIDKTETFTLSELATATNNFSIDNKIGSGSFGIVYKGKLEDGREVAIKRGETCTRKKKFQEKENAFDSEVALLSRLNHIHLVSLIGFCDENDEKLLVYEYMTNGSLHYHLHDNHNTEKTSSTVNSWRVRIKIALDAARGIEYLHNYAVPSIIHRDIKSSNILLDSNWNARVSDFGLSLMGQQEQISAKAVGTVGYIDPEYYVMNVLTDKSDVYGLGVVMLELLTGKKAVFREEGDGESTPVGVVEYAGPRMRGGELWSVLDYRVGEPDVNEIEGLEIMAYSAMHCVRLEAKERPCVSEIVANLERALASVDGCPGRLSVTVFSSSAPFE 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1248 819 MobiDBLite consensus disorder prediction 372 394 - -
Acco10g1248 819 MobiDBLite consensus disorder prediction 449 471 - -
Acco10g1248 819 CDD STKc_IRAK 516 795 - -
Acco10g1248 819 SMART serkin_6 510 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1248 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Acco10g1248 819 Pfam Protein kinase domain 511 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1248 819 Pfam Regulator of chromosome condensation (RCC1) repeat 207 231 - -
Acco10g1248 819 ProSiteProfiles Protein kinase domain profile. 510 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco10g1248 819 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 201 801 IPR044815 GO:0004674
Acco10g1248 819 Gene3D Phosphorylase Kinase; domain 1 469 590 - -
Acco10g1248 819 MobiDBLite consensus disorder prediction 373 388 - -
Acco10g1248 819 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Acco10g1248 819 Gene3D Transferase(Phosphotransferase) domain 1 591 802 - -
Acco10g1248 819 FunFam receptor-like serine/threonine-protein kinase NCRK 484 590 - -
Acco10g1248 819 SUPERFAMILY RCC1/BLIP-II 118 347 IPR009091 -
Acco10g1248 819 SUPERFAMILY Protein kinase-like (PK-like) 486 793 IPR011009 -
Acco10g1248 819 Gene3D - 20 200 IPR009091 -
Acco10g1248 819 Gene3D - 201 329 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1248 Acco-ChrAcco10 26368295 26370754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1248 6 797 Receptor kinase-like Gene Family AT3G55950 52.030 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Acco10g1248 Pkinase 2.5e-44 CL0016