Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1242 ATGACTCTAAGCCCAAGCCTAATAGTTGCTCACTCTCAAAGGCCCAAAAAGACATTCCTGTATAACTACAAAAATTACCATTGCTGTGATCTCAAAAGTTTCACTCGCGGAGCTAGTCGGCGAATCAGAGTGTTTGGAAGAAGCATAGGGATGGCGAAAATGACGTCGTTGTTGCTCTGGACATTGGTCCTCTTCGGCACTCTCGCTCTCATCCAGGCGAAGAAGTCGAAGGAGGATTTGAAAGAAGTGACGCACAAGGTTTATTTCGACATCGAGATTGATGGAAAGCCTGCTGGTCGTGTTGTAATGGGTCTCTTTGGGAAGGCGGTTCCTAAAACTGCGGAAAACTTTCGAGCTCTCTGCACAGGGGAGAAAGGAACTGGAAAAAGTGGAAAGGCTCTCCATTACAAGGGCAGCTCATTCCACAGGATTATTCCTAGCTTTATGATCCAAGGAGGTGATTTTACCCATGGCAACGGAATGGGCGGTGAGTCAATCTATGGAGAGAAGTTTGCTGATGAGAACTTCAAGCTGAAGCATACTGGACCAGGATTTCTATCAATGGCAAATGCTGGTCCTGATACCAATGGTTCACAATTCTTCATTACAACGGTGACAACTAGCTGGTTGGACGGAAGGCACGTGGTGTTTGGGAAAGTGACTTCTGGAATGGATGTGGTGTACAAGATGGAGGCTGAAGGAAGGCAAAGTGGCACCCCCAAGAGCAAGGTTGTCATTGCTGATAGCGGTGAACTCCCATTATAA 765 0.468 MTLSPSLIVAHSQRPKKTFLYNYKNYHCCDLKSFTRGASRRIRVFGRSIGMAKMTSLLLWTLVLFGTLALIQAKKSKEDLKEVTHKVYFDIEIDGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGTGKSGKALHYKGSSFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVTSGMDVVYKMEAEGRQSGTPKSKVVIADSGELPL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1242 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 199 211 IPR002130 GO:0000413|GO:0003755
Acco10g1242 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 105 120 IPR002130 GO:0000413|GO:0003755
Acco10g1242 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 212 227 IPR002130 GO:0000413|GO:0003755
Acco10g1242 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
Acco10g1242 254 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 141 153 IPR002130 GO:0000413|GO:0003755
Acco10g1242 254 SUPERFAMILY Cyclophilin-like 83 252 IPR029000 -
Acco10g1242 254 Gene3D - 72 253 IPR029000 -
Acco10g1242 254 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 136 153 IPR020892 GO:0003755|GO:0006457
Acco10g1242 254 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 251 IPR002130 GO:0000413|GO:0003755
Acco10g1242 254 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 88 248 IPR002130 GO:0000413|GO:0003755
Acco10g1242 254 CDD cyclophilin_ABH_like 85 250 - -
Acco10g1242 254 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 86 252 - -
Acco10g1242 254 FunFam Peptidyl-prolyl cis-trans isomerase 80 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1242 Acco-ChrAcco10 26318918 26322601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1242 99 231 U-box Gene Family AT5G67530 47.015 1.16e-27 109