LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco10g1231	ATGGAGAATTCATGGGAGAAAAGTGTTACGTACTCCCTCAACACCATCTTCCGCCTCTTCTCTGCCTACCTCGTCTTCGTCATGCAGATCGGCTTTGCTATGCTCTGTGCCGGCTCCGTCAGAGCCAAAAACGCCGTCAATATTATGCTCACTAATGTCGTCGACGCTGTCGTAGGAAGCATCTCTTTCTACCTCTTCGGCTTCGCATTTGCCTTCGGCTCTGGTTCCAATGGCAACCCTTTCATTGGCACTCATCTATTTGCTCTTTCTGGCATTCCAAATGACACTTACGATTACAGTTTCTATCTTTACCAATGGTCTTTTGCCATAGCCGTGGCGGGCATTACAAGTGGGTCCATCGCTGAGAGAACCCTGTTCAGTGCTTATCTTGTTTTTAGTTTTTTCCTTGCGGGCTTTGTGTACCCGGTCGTGGTCCATTGGGTCTGGTCTTCCGACGGTTGGCTCAGTCCCGATTCGAGCAATCTGTTTCTGGGCTCAGGGGCGATTGACTTTGCTGGGAGTGGAGTGGTCCATATGGTAGGGGGAGTAGCAGGCTTCTGGGGTTCACTCATACTAGGCCCACGGGTTGGGCGGTTTGATGCATTTGGCAAGCCCGTGACGTTCCGTGGCCACAATGCGAGCCTAGTGGTGCTTGGGACGTTTCTTTTGTGGTTTGGATGGTTCGGGTTTAATCCCGTCTCATTTGATAAGATTCTTGTGCCGTATCCTGACGCATCCAATGAGGGTAATTGGACCTCCATCGGTCGGACTGCAGTCGTGACCACCTTAGCTGGTTCAACAGCGGGAATCATCACCTTGTTCGGCCGGCGATTGATAATCGGTCATTGGGATGCAATTGGTGTTTGCAATGGATTGCTTGGTGGGTTTGTGGCTATCACCTCGGGTTGCTCCGTTGTTGAGCCATGGGCTGCTATTATTTGTGGGTTCGTCTCAGCTTGGGTCTTGATCGGGCTGAATATATTGGCCCTAAAGTTAAACTACGACGACCCGTTGGAGGCAGCCCAATTGCACGCTGGGTGTGGAGCTTGGGGTTTGATATTCACAGGGTTGTTTGCCAAAGAGGAGTTTGTGATTCAAGCCTACGATAGCGGTGCGACTGGGGTGTCTAGGCCCTTTGGACTTCTATTAGGAGGTGGATGGGCCTTGATTGGAGCCCAAATTATTGAATTGCTAGCTATATTGGTTTGGGTTAGTATCACCATGGGCCCAATGTTCTATGTCTTGGACAAGCTTAAGCTCCTGAGAATTTCGAAAGACGATGAACTTACAGGCCTTGATATCTCAACCCATGGAGGATCTGCTTATACTCATCACGATGACGACTTTCCTTCATCTTACGCGGATTTTATACGCCTTCGAGGTAATGAATAA	1392	0.4964	MENSWEKSVTYSLNTIFRLFSAYLVFVMQIGFAMLCAGSVRAKNAVNIMLTNVVDAVVGSISFYLFGFAFAFGSGSNGNPFIGTHLFALSGIPNDTYDYSFYLYQWSFAIAVAGITSGSIAERTLFSAYLVFSFFLAGFVYPVVVHWVWSSDGWLSPDSSNLFLGSGAIDFAGSGVVHMVGGVAGFWGSLILGPRVGRFDAFGKPVTFRGHNASLVVLGTFLLWFGWFGFNPVSFDKILVPYPDASNEGNWTSIGRTAVVTTLAGSTAGIITLFGRRLIIGHWDAIGVCNGLLGGFVAITSGCSVVEPWAAIICGFVSAWVLIGLNILALKLNYDDPLEAAQLHAGCGAWGLIFTGLFAKEEFVIQAYDSGATGVSRPFGLLLGGGWALIGAQIIELLAILVWVSITMGPMFYVLDKLKLLRISKDDELTGLDISTHGGSAYTHHDDDFPSSYADFIRLRGNE	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco10g1231	463	FunFam	Ammonium transporter	1	455	-	-
	Acco10g1231	463	NCBIfam	ammonium transporter	14	442	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Acco10g1231	463	PANTHER	AMMONIUM TRANSPORTER	10	439	-	-
	Acco10g1231	463	SUPERFAMILY	Ammonium transporter	11	423	-	-
	Acco10g1231	463	Gene3D	Ammonium transporter AmtB like domains	2	456	IPR029020	-
	Acco10g1231	463	Pfam	Ammonium Transporter Family	17	442	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Acco10g1231	463	ProSitePatterns	Ammonium transporters signature.	170	195	IPR018047	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco10g1231	Acco-ChrAcco10	26223702	26225093	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco10g1231	9	448	Inorganic Solute Cotransporters	AT4G13510	65.158	0.0	583