Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco10g1227 ATGCCCACCATTGCCGCGCGTAAGCTCGGGAAGGAAGCTCTTTCTGAGACAATGGCCATCGTGCCGGAGAAGACAGCTTCCGATGCCCGATCTGACCCCAACTCCACTGCTTGCAAGAGGAAGTTGAGATCCGATGGGCCGCTGATTTTGGACAGTCCGATCTCTTCACCCACCAAATGGAAATCGCCTCGACAATGTAGCAGTGAGAGCCCAAATCGCGCTGTCACCGCAAAAGAGATGGTTGCTACTGAAGGTGGAATCAAATCGCATAAATCGCCGTCTAAGTCAATGCAGGATAGTTTTGCAGATAAACCGATATGGAATCCCAAAGATGGTGAGCAAGTAAGGACAGTGAAGGAGGCATTGCACGTGTCTACGGCACCATCTACAATTGTCTGCCGTGAAGACGAGCAGAATATGGTTTTTGAGTTCTGCAAGTCATGCGTTGAACATAAGAAGGCTGGGAGTATGTACATATGTGGGTGTCCCGGTACTGGGAAATCGCTATCCATGGAGAAAGTAAAAAAGCTTTTAGTTGATTGGGCTAAACAGGCAGGCTTTCTTCAGCCCGATGTCTTATCTGTGAACTGTACATCACTTGCAAATACATCTGACATTTTCAGCAAGATGCTTGGATTAAACCAACCACAGGGAAAAAAGACTTCAGCTTCTCCCTTACAACAACTTCAGAGCTTTTACTCTCAGAAGTCGTCAAGCCAGAACATGATATTGATGGTGGTTGACGAATTAGATTATCTGATCACCAAAGATAGGGCTGTGCTTCACGATCTCTTCATGCTCACCACTTTCCCATTTTCTAGATGTATATTAATAGGGATATCAAATGCGATTGACCTTGCCGATCGTTTTCTTCCAAGGTTGAAATCATCGAACTGCAAGCCTATAATTGTAACATTTCGAGCATACTCTAAAGACCAGATCCTCGGCATTCTGAAAGAAAGGCTAAGGGAACTTCCTTACACTGTGTTCCAACATCAAGCACTAGAGCTCTGTGCCCGGAAAGTTGCTGCTGCTTCTGGAGACATGCGAAAGGCTCTTTGTTTTTGCAGGAGCGCAATTGAGATGCTAGAGGCAGAAATTAGAGAATCTATTGGCCTATCAGAAATTTCATTGGAAGAGAAAGCTTCCCCTCGACAAAATATAGCTTCTGACCCCGATCATGTAAAACAAGAAGAATTTGATGCTGTAAGGATTGATCATATGGCTCTTGCCTTGTCCAAAACTTATAGATCTCCTGTGGTGGATACAATACAGTCTCTACCACATCATCAACAGATTATCCTTTGCTCTTTGATGAAACAATTCCTTGGAGCGAAGAAAGATACATTCCTTGGCGAGTTGTACAAATCTTACACGGGCATATGCAAATCATCACTGATTCCTCCGGCTGGAATTTTGGAATTTTCAAACATGTGCAGAGTATTGAATGATCAGGGGCTTATCAAACTAGGATCATCACGGGAGGACAAACTGAAGAGGGTGACACTAAACATAGATGAAGCTGATATTACCTTTGCATTGCAGGGAATTCGTTTCTTTAGAAATTGTCTTCAATAA 1578 0.4379 MPTIAARKLGKEALSETMAIVPEKTASDARSDPNSTACKRKLRSDGPLILDSPISSPTKWKSPRQCSSESPNRAVTAKEMVATEGGIKSHKSPSKSMQDSFADKPIWNPKDGEQVRTVKEALHVSTAPSTIVCREDEQNMVFEFCKSCVEHKKAGSMYICGCPGTGKSLSMEKVKKLLVDWAKQAGFLQPDVLSVNCTSLANTSDIFSKMLGLNQPQGKKTSASPLQQLQSFYSQKSSSQNMILMVVDELDYLITKDRAVLHDLFMLTTFPFSRCILIGISNAIDLADRFLPRLKSSNCKPIIVTFRAYSKDQILGILKERLRELPYTVFQHQALELCARKVAAASGDMRKALCFCRSAIEMLEAEIRESIGLSEISLEEKASPRQNIASDPDHVKQEEFDAVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSLMKQFLGAKKDTFLGELYKSYTGICKSSLIPPAGILEFSNMCRVLNDQGLIKLGSSREDKLKRVTLNIDEADITFALQGIRFFRNCLQ 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco10g1227 525 FunFam Cell division control protein 427 517 - -
Acco10g1227 525 SUPERFAMILY "Winged helix" DNA-binding domain 420 523 IPR036390 -
Acco10g1227 525 FunFam Cell division control protein 112 297 - -
Acco10g1227 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 374 IPR027417 -
Acco10g1227 525 CDD Cdc6_C 428 510 IPR015163 -
Acco10g1227 525 Gene3D - 111 299 IPR027417 -
Acco10g1227 525 Pfam AAA lid domain 331 366 IPR041083 -
Acco10g1227 525 FunFam Cell division control protein 298 424 - -
Acco10g1227 525 Pfam CDC6, C terminal winged helix domain 435 513 IPR015163 -
Acco10g1227 525 Pfam AAA domain 152 268 IPR003593 GO:0016887
Acco10g1227 525 PIRSF Cdc6 5 525 IPR016314 GO:0006270|GO:0051301
Acco10g1227 525 Gene3D - 300 423 - -
Acco10g1227 525 SMART Cdc6_C_2 435 514 IPR015163 -
Acco10g1227 525 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 47 523 - -
Acco10g1227 525 CDD AAA 137 296 - -
Acco10g1227 525 MobiDBLite consensus disorder prediction 55 74 - -
Acco10g1227 525 Gene3D - 424 515 IPR036388 -
Acco10g1227 525 MobiDBLite consensus disorder prediction 19 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco10g1227 Acco-ChrAcco10 26190120 26195311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco10g1227 30 524 Core DNA Replication Machinery Family AT2G29680 59.881 0.0 579